Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
C11orf88Q6PI97 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 AC112777.1-201ENST00000540175 1423 ntBASIC15.58■□□□□ 0.08
C11orf88Q6PI97 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.58■□□□□ 0.08
C11orf88Q6PI97 AL499627.1-201ENST00000569373 2188 ntBASIC15.58■□□□□ 0.08
C11orf88Q6PI97 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 NORAD-201ENST00000565493 5339 ntBASIC15.57■□□□□ 0.08
C11orf88Q6PI97 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 AC093677.2-201ENST00000600169 1863 ntBASIC15.57■□□□□ 0.08
C11orf88Q6PI97 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 UNC93B2-201ENST00000285383 730 ntBASIC15.57■□□□□ 0.08
C11orf88Q6PI97 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 NIFKP9-201ENST00000419265 221 ntBASIC15.57■□□□□ 0.08
C11orf88Q6PI97 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 HEIH-201ENST00000623091 1652 ntBASIC15.57■□□□□ 0.08
C11orf88Q6PI97 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.57■□□□□ 0.08
C11orf88Q6PI97 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 FAM197Y1-201ENST00000421178 764 ntBASIC15.56■□□□□ 0.08
C11orf88Q6PI97 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms