Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC10.92□□□□□ -0.66
HSPG2P98160 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.92□□□□□ -0.66
HSPG2P98160 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.92□□□□□ -0.66
HSPG2P98160 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC10.92□□□□□ -0.66
HSPG2P98160 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC10.92□□□□□ -0.66
HSPG2P98160 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
HSPG2P98160 TP53TG3HP-202ENST00000569755 579 ntBASIC10.92□□□□□ -0.66
HSPG2P98160 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.92□□□□□ -0.66
HSPG2P98160 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
HSPG2P98160 LINC01006-201ENST00000333319 2292 ntBASIC10.92□□□□□ -0.66
HSPG2P98160 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
HSPG2P98160 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC10.92□□□□□ -0.66
HSPG2P98160 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
HSPG2P98160 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC10.91□□□□□ -0.66
HSPG2P98160 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
HSPG2P98160 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.91□□□□□ -0.66
HSPG2P98160 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC10.91□□□□□ -0.66
HSPG2P98160 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
HSPG2P98160 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.91□□□□□ -0.66
HSPG2P98160 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC10.91□□□□□ -0.66
HSPG2P98160 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC10.91□□□□□ -0.66
HSPG2P98160 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.91□□□□□ -0.66
HSPG2P98160 TSSK5P-201ENST00000423978 907 ntBASIC10.91□□□□□ -0.66
HSPG2P98160 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.91□□□□□ -0.66
HSPG2P98160 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC10.91□□□□□ -0.66
HSPG2P98160 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 AC138969.3-201ENST00000546612 1459 ntBASIC10.91□□□□□ -0.66
HSPG2P98160 AC138932.2-201ENST00000548268 1459 ntBASIC10.91□□□□□ -0.66
HSPG2P98160 AC126755.4-201ENST00000549796 1459 ntBASIC10.91□□□□□ -0.66
HSPG2P98160 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC10.91□□□□□ -0.66
HSPG2P98160 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 AL162274.1-201ENST00000617191 1098 ntBASIC10.91□□□□□ -0.66
HSPG2P98160 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC10.91□□□□□ -0.66
HSPG2P98160 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
HSPG2P98160 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.91□□□□□ -0.66
HSPG2P98160 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 DGCR5-201ENST00000399539 862 ntBASIC10.91□□□□□ -0.66
HSPG2P98160 HCG4-201ENST00000418983 998 ntBASIC10.91□□□□□ -0.66
HSPG2P98160 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.91□□□□□ -0.66
HSPG2P98160 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HSPG2P98160 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
HSPG2P98160 USP48-205ENST00000421625 2818 ntTSL 2 BASIC10.91□□□□□ -0.66
HSPG2P98160 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC10.9□□□□□ -0.66
HSPG2P98160 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC10.9□□□□□ -0.66
HSPG2P98160 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 AC097637.2-201ENST00000624096 1997 ntBASIC10.9□□□□□ -0.66
HSPG2P98160 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC10.9□□□□□ -0.66
HSPG2P98160 SPDYE7P-202ENST00000420373 878 ntBASIC10.9□□□□□ -0.66
HSPG2P98160 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.9□□□□□ -0.66
HSPG2P98160 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
HSPG2P98160 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
HSPG2P98160 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
HSPG2P98160 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
HSPG2P98160 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.9□□□□□ -0.66
HSPG2P98160 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC10.9□□□□□ -0.66
HSPG2P98160 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.9□□□□□ -0.66
HSPG2P98160 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HSPG2P98160 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC10.9□□□□□ -0.66
HSPG2P98160 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
HSPG2P98160 AC002056.1-201ENST00000395613 760 ntBASIC10.9□□□□□ -0.67
HSPG2P98160 AC112492.5-201ENST00000421897 457 ntBASIC10.9□□□□□ -0.67
HSPG2P98160 RNA5SP423-201ENST00000517127 109 ntBASIC10.9□□□□□ -0.67
HSPG2P98160 MIR4538-201ENST00000581377 78 ntBASIC10.9□□□□□ -0.67
HSPG2P98160 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC10.9□□□□□ -0.67
HSPG2P98160 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
HSPG2P98160 AC018445.3-201ENST00000624177 1945 ntBASIC10.9□□□□□ -0.67
HSPG2P98160 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
HSPG2P98160 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
HSPG2P98160 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
HSPG2P98160 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
HSPG2P98160 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
HSPG2P98160 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms