Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.72■□□□□ 0.59
USP46P62068 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.72■□□□□ 0.59
USP46P62068 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.72■□□□□ 0.59
USP46P62068 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.72■□□□□ 0.59
USP46P62068 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP46P62068 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP46P62068 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP46P62068 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.72■□□□□ 0.59
USP46P62068 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP46P62068 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
USP46P62068 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.71■□□□□ 0.59
USP46P62068 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
USP46P62068 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
USP46P62068 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
USP46P62068 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
USP46P62068 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.71■□□□□ 0.59
USP46P62068 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
USP46P62068 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
USP46P62068 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.71■□□□□ 0.59
USP46P62068 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
USP46P62068 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.71■□□□□ 0.59
USP46P62068 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 AC008608.2-201ENST00000606089 416 ntBASIC18.71■□□□□ 0.59
USP46P62068 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
USP46P62068 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.71■□□□□ 0.59
USP46P62068 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.71■□□□□ 0.59
USP46P62068 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.71■□□□□ 0.59
USP46P62068 AC097374.2-201ENST00000618617 1306 ntBASIC18.71■□□□□ 0.59
USP46P62068 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
USP46P62068 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
USP46P62068 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP46P62068 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.71■□□□□ 0.58
USP46P62068 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.7■□□□□ 0.58
USP46P62068 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 AC096633.1-201ENST00000422446 749 ntBASIC18.7■□□□□ 0.58
USP46P62068 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 AC106795.1-205ENST00000512851 1056 ntBASIC18.7■□□□□ 0.58
USP46P62068 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
USP46P62068 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.7■□□□□ 0.58
USP46P62068 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.7■□□□□ 0.58
USP46P62068 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.7■□□□□ 0.58
USP46P62068 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
USP46P62068 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP46P62068 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.69■□□□□ 0.58
USP46P62068 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
USP46P62068 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP46P62068 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.69■□□□□ 0.58
USP46P62068 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
USP46P62068 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
USP46P62068 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP46P62068 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.69■□□□□ 0.58
USP46P62068 FGFR3P6-201ENST00000457012 610 ntBASIC18.69■□□□□ 0.58
USP46P62068 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.69■□□□□ 0.58
USP46P62068 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.69■□□□□ 0.58
USP46P62068 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.69■□□□□ 0.58
USP46P62068 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP46P62068 AL355877.3-201ENST00000622820 899 ntBASIC18.69■□□□□ 0.58
USP46P62068 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms