Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDE6BP35913 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDE6BP35913 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PDE6BP35913 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDE6BP35913 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDE6BP35913 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.83■■□□□ 1.09
PDE6BP35913 OR7E47P-204ENST00000575924 449 ntBASIC21.83■■□□□ 1.09
PDE6BP35913 AC023141.13-201ENST00000604991 943 ntBASIC21.83■■□□□ 1.09
PDE6BP35913 AC019129.2-201ENST00000609837 1235 ntBASIC21.83■■□□□ 1.09
PDE6BP35913 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDE6BP35913 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDE6BP35913 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDE6BP35913 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
PDE6BP35913 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PDE6BP35913 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.82■■□□□ 1.08
PDE6BP35913 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.82■■□□□ 1.08
PDE6BP35913 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
PDE6BP35913 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 COX20P2-201ENST00000452636 358 ntBASIC21.82■■□□□ 1.08
PDE6BP35913 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.82■■□□□ 1.08
PDE6BP35913 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.82■■□□□ 1.08
PDE6BP35913 AC091812.2-201ENST00000619081 385 ntBASIC21.82■■□□□ 1.08
PDE6BP35913 AL513210.1-201ENST00000629608 234 ntBASIC21.82■■□□□ 1.08
PDE6BP35913 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.82■■□□□ 1.08
PDE6BP35913 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.82■■□□□ 1.08
PDE6BP35913 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDE6BP35913 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
PDE6BP35913 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.81■■□□□ 1.08
PDE6BP35913 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.81■■□□□ 1.08
PDE6BP35913 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 BCRP1-201ENST00000444246 691 ntBASIC21.81■■□□□ 1.08
PDE6BP35913 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.81■■□□□ 1.08
PDE6BP35913 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.81■■□□□ 1.08
PDE6BP35913 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PDE6BP35913 STK19B-204ENST00000512515 211 ntBASIC21.81■■□□□ 1.08
PDE6BP35913 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.81■■□□□ 1.08
PDE6BP35913 AC109462.3-201ENST00000573934 613 ntBASIC21.81■■□□□ 1.08
PDE6BP35913 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.81■■□□□ 1.08
PDE6BP35913 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.81■■□□□ 1.08
PDE6BP35913 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.81■■□□□ 1.08
PDE6BP35913 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PDE6BP35913 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PDE6BP35913 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDE6BP35913 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE6BP35913 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE6BP35913 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE6BP35913 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE6BP35913 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.8■■□□□ 1.08
PDE6BP35913 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE6BP35913 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.8■■□□□ 1.08
PDE6BP35913 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE6BP35913 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.8■■□□□ 1.08
PDE6BP35913 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE6BP35913 STK25P1-201ENST00000585406 838 ntBASIC21.8■■□□□ 1.08
PDE6BP35913 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE6BP35913 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.8■■□□□ 1.08
PDE6BP35913 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.8■■□□□ 1.08
PDE6BP35913 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDE6BP35913 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDE6BP35913 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDE6BP35913 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.8■■□□□ 1.08
PDE6BP35913 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.8■■□□□ 1.08
PDE6BP35913 AC097637.2-201ENST00000624096 1997 ntBASIC21.79■■□□□ 1.08
PDE6BP35913 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
PDE6BP35913 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
PDE6BP35913 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDE6BP35913 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms