Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 AC133963.1-201ENST00000504166 1679 ntBASIC17.1■□□□□ 0.33
HTR1EP28566 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
HTR1EP28566 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.09■□□□□ 0.33
HTR1EP28566 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.09■□□□□ 0.33
HTR1EP28566 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.09■□□□□ 0.33
HTR1EP28566 AC069148.1-201ENST00000608741 768 ntBASIC17.09■□□□□ 0.33
HTR1EP28566 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HTR1EP28566 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
HTR1EP28566 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HTR1EP28566 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTR1EP28566 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HTR1EP28566 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1EP28566 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
HTR1EP28566 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.08■□□□□ 0.33
HTR1EP28566 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTR1EP28566 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
HTR1EP28566 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTR1EP28566 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HTR1EP28566 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTR1EP28566 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.08■□□□□ 0.33
HTR1EP28566 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.08■□□□□ 0.33
HTR1EP28566 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTR1EP28566 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HTR1EP28566 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.08■□□□□ 0.32
HTR1EP28566 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HTR1EP28566 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.08■□□□□ 0.32
HTR1EP28566 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.08■□□□□ 0.32
HTR1EP28566 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.08■□□□□ 0.32
HTR1EP28566 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.08■□□□□ 0.32
HTR1EP28566 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.08■□□□□ 0.32
HTR1EP28566 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HTR1EP28566 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
HTR1EP28566 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1EP28566 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HTR1EP28566 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.07■□□□□ 0.32
HTR1EP28566 HOXB1-202ENST00000577092 1414 ntBASIC17.07■□□□□ 0.32
HTR1EP28566 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HTR1EP28566 AC005332.1-201ENST00000577698 1310 ntBASIC17.07■□□□□ 0.32
HTR1EP28566 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HTR1EP28566 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.07■□□□□ 0.32
HTR1EP28566 DUTP2-201ENST00000519164 463 ntBASIC17.07■□□□□ 0.32
HTR1EP28566 AL023803.3-201ENST00000615559 522 ntBASIC17.07■□□□□ 0.32
HTR1EP28566 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
HTR1EP28566 AC116407.4-201ENST00000623319 1061 ntBASIC17.07■□□□□ 0.32
HTR1EP28566 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HTR1EP28566 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HTR1EP28566 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HTR1EP28566 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.07■□□□□ 0.32
HTR1EP28566 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HTR1EP28566 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.07■□□□□ 0.32
HTR1EP28566 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1EP28566 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.07■□□□□ 0.32
HTR1EP28566 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HTR1EP28566 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 AC011676.5-201ENST00000624864 2660 ntBASIC17.06■□□□□ 0.32
HTR1EP28566 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HTR1EP28566 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
HTR1EP28566 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HTR1EP28566 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms