Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 AC005104.2-201ENST00000427818 678 ntBASIC18.73■□□□□ 0.59
MMP8P22894 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.73■□□□□ 0.59
MMP8P22894 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.73■□□□□ 0.59
MMP8P22894 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.73■□□□□ 0.59
MMP8P22894 AL121672.3-201ENST00000608644 468 ntBASIC18.73■□□□□ 0.59
MMP8P22894 IGHV3-41-201ENST00000613121 348 ntBASIC18.73■□□□□ 0.59
MMP8P22894 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.73■□□□□ 0.59
MMP8P22894 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.73■□□□□ 0.59
MMP8P22894 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.73■□□□□ 0.59
MMP8P22894 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.73■□□□□ 0.59
MMP8P22894 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
MMP8P22894 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MMP8P22894 AC010460.3-201ENST00000511359 1579 ntBASIC18.72■□□□□ 0.59
MMP8P22894 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP8P22894 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP8P22894 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.72■□□□□ 0.59
MMP8P22894 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
MMP8P22894 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP8P22894 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.72■□□□□ 0.59
MMP8P22894 AC139713.2-201ENST00000641328 2723 ntBASIC18.72■□□□□ 0.59
MMP8P22894 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
MMP8P22894 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 PCED1CP-201ENST00000419887 785 ntBASIC18.72■□□□□ 0.59
MMP8P22894 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.72■□□□□ 0.59
MMP8P22894 BX276092.5-203ENST00000456199 560 ntBASIC18.72■□□□□ 0.59
MMP8P22894 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.72■□□□□ 0.59
MMP8P22894 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP8P22894 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.72■□□□□ 0.59
MMP8P22894 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP8P22894 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
MMP8P22894 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP8P22894 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP8P22894 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MMP8P22894 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP8P22894 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
MMP8P22894 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP8P22894 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MMP8P22894 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP8P22894 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP8P22894 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP8P22894 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP8P22894 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 AL645608.8-201ENST00000606034 2086 ntBASIC18.71■□□□□ 0.59
MMP8P22894 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 CHCHD2P8-201ENST00000429873 447 ntBASIC18.71■□□□□ 0.59
MMP8P22894 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 AC005336.2-201ENST00000593183 939 ntBASIC18.71■□□□□ 0.59
MMP8P22894 AC125634.1-201ENST00000438758 1403 ntBASIC18.71■□□□□ 0.59
MMP8P22894 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP8P22894 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MMP8P22894 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.71■□□□□ 0.58
MMP8P22894 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
MMP8P22894 AC141586.5-201ENST00000624546 2050 ntBASIC18.7■□□□□ 0.58
MMP8P22894 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.7■□□□□ 0.58
MMP8P22894 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
MMP8P22894 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 COX5BP2-201ENST00000392354 334 ntBASIC18.7■□□□□ 0.58
MMP8P22894 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP8P22894 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP8P22894 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP8P22894 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.7■□□□□ 0.58
MMP8P22894 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.7■□□□□ 0.58
MMP8P22894 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP8P22894 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms