Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.93■□□□□ 0.46
CTPS1P17812 AC009949.1-201ENST00000623048 1830 ntBASIC17.93■□□□□ 0.46
CTPS1P17812 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTPS1P17812 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTPS1P17812 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CTPS1P17812 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTPS1P17812 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTPS1P17812 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.93■□□□□ 0.46
CTPS1P17812 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.92■□□□□ 0.46
CTPS1P17812 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.92■□□□□ 0.46
CTPS1P17812 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.92■□□□□ 0.46
CTPS1P17812 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CTPS1P17812 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTPS1P17812 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CTPS1P17812 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.92■□□□□ 0.46
CTPS1P17812 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.92■□□□□ 0.46
CTPS1P17812 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTPS1P17812 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.92■□□□□ 0.46
CTPS1P17812 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.92■□□□□ 0.46
CTPS1P17812 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.92■□□□□ 0.46
CTPS1P17812 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.92■□□□□ 0.46
CTPS1P17812 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTPS1P17812 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTPS1P17812 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTPS1P17812 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTPS1P17812 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CTPS1P17812 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTPS1P17812 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 AL133373.2-201ENST00000623187 2828 ntBASIC17.91■□□□□ 0.46
CTPS1P17812 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CTPS1P17812 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 AC125634.1-201ENST00000438758 1403 ntBASIC17.91■□□□□ 0.46
CTPS1P17812 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CTPS1P17812 AC012317.2-201ENST00000623305 2251 ntBASIC17.91■□□□□ 0.46
CTPS1P17812 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CTPS1P17812 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.91■□□□□ 0.46
CTPS1P17812 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.91■□□□□ 0.46
CTPS1P17812 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.91■□□□□ 0.46
CTPS1P17812 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.91■□□□□ 0.46
CTPS1P17812 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.91■□□□□ 0.46
CTPS1P17812 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.91■□□□□ 0.46
CTPS1P17812 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS1P17812 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.9■□□□□ 0.46
CTPS1P17812 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.9■□□□□ 0.46
CTPS1P17812 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CTPS1P17812 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 AC096582.2-201ENST00000510860 516 ntBASIC17.9■□□□□ 0.46
CTPS1P17812 FOSL1P1-201ENST00000511041 816 ntBASIC17.9■□□□□ 0.46
CTPS1P17812 PRELID1P1-202ENST00000567272 903 ntBASIC17.9■□□□□ 0.46
CTPS1P17812 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.9■□□□□ 0.46
CTPS1P17812 AL138831.2-201ENST00000606564 490 ntBASIC17.9■□□□□ 0.46
CTPS1P17812 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.9■□□□□ 0.46
CTPS1P17812 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.9■□□□□ 0.46
CTPS1P17812 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CTPS1P17812 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS1P17812 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTPS1P17812 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.9■□□□□ 0.46
CTPS1P17812 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.9■□□□□ 0.46
CTPS1P17812 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms