Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RBP1P09455 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RBP1P09455 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RBP1P09455 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RBP1P09455 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RBP1P09455 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RBP1P09455 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RBP1P09455 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RBP1P09455 AC009949.1-201ENST00000623048 1830 ntBASIC17.58■□□□□ 0.41
RBP1P09455 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.58■□□□□ 0.41
RBP1P09455 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RBP1P09455 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RBP1P09455 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.58■□□□□ 0.41
RBP1P09455 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RBP1P09455 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RBP1P09455 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RBP1P09455 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
RBP1P09455 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RBP1P09455 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.58■□□□□ 0.4
RBP1P09455 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.58■□□□□ 0.4
RBP1P09455 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.58■□□□□ 0.4
RBP1P09455 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.58■□□□□ 0.4
RBP1P09455 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RBP1P09455 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.58■□□□□ 0.4
RBP1P09455 AL138966.2-201ENST00000621997 464 ntBASIC17.58■□□□□ 0.4
RBP1P09455 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.58■□□□□ 0.4
RBP1P09455 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.58■□□□□ 0.4
RBP1P09455 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RBP1P09455 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBP1P09455 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RBP1P09455 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.57■□□□□ 0.4
RBP1P09455 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.57■□□□□ 0.4
RBP1P09455 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.57■□□□□ 0.4
RBP1P09455 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 AC140113.3-201ENST00000605663 199 ntBASIC17.57■□□□□ 0.4
RBP1P09455 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RBP1P09455 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.57■□□□□ 0.4
RBP1P09455 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBP1P09455 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RBP1P09455 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.56■□□□□ 0.4
RBP1P09455 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.56■□□□□ 0.4
RBP1P09455 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
RBP1P09455 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.56■□□□□ 0.4
RBP1P09455 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.56■□□□□ 0.4
RBP1P09455 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.56■□□□□ 0.4
RBP1P09455 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.56■□□□□ 0.4
RBP1P09455 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.56■□□□□ 0.4
RBP1P09455 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.56■□□□□ 0.4
RBP1P09455 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 AL031432.5-201ENST00000641059 760 ntBASIC17.56■□□□□ 0.4
RBP1P09455 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RBP1P09455 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
RBP1P09455 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.56■□□□□ 0.4
RBP1P09455 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RBP1P09455 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms