Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
TPM3P06753 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.02■□□□□ 0.8
TPM3P06753 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.02■□□□□ 0.8
TPM3P06753 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TPM3P06753 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TPM3P06753 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.02■□□□□ 0.79
TPM3P06753 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.02■□□□□ 0.79
TPM3P06753 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TPM3P06753 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
TPM3P06753 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TPM3P06753 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.01■□□□□ 0.79
TPM3P06753 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.01■□□□□ 0.79
TPM3P06753 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.01■□□□□ 0.79
TPM3P06753 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.01■□□□□ 0.79
TPM3P06753 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TPM3P06753 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.01■□□□□ 0.79
TPM3P06753 RARRES2P10-201ENST00000564312 460 ntBASIC20.01■□□□□ 0.79
TPM3P06753 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.01■□□□□ 0.79
TPM3P06753 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.01■□□□□ 0.79
TPM3P06753 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
TPM3P06753 KRT8P7-201ENST00000533003 1432 ntBASIC20.01■□□□□ 0.79
TPM3P06753 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TPM3P06753 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TPM3P06753 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM3P06753 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TPM3P06753 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TPM3P06753 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 AC036111.1-201ENST00000533973 1582 ntBASIC20■□□□□ 0.79
TPM3P06753 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20■□□□□ 0.79
TPM3P06753 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20■□□□□ 0.79
TPM3P06753 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20■□□□□ 0.79
TPM3P06753 AC099343.3-201ENST00000605834 2503 ntBASIC20■□□□□ 0.79
TPM3P06753 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20■□□□□ 0.79
TPM3P06753 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 CA15P1-201ENST00000481698 905 ntBASIC20■□□□□ 0.79
TPM3P06753 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20■□□□□ 0.79
TPM3P06753 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20■□□□□ 0.79
TPM3P06753 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TPM3P06753 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20■□□□□ 0.79
TPM3P06753 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20■□□□□ 0.79
TPM3P06753 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TPM3P06753 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM3P06753 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20■□□□□ 0.79
TPM3P06753 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20■□□□□ 0.79
TPM3P06753 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TPM3P06753 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TPM3P06753 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM3P06753 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM3P06753 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM3P06753 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.99■□□□□ 0.79
TPM3P06753 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM3P06753 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TPM3P06753 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TPM3P06753 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM3P06753 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.99■□□□□ 0.79
TPM3P06753 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.99■□□□□ 0.79
TPM3P06753 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.99■□□□□ 0.79
TPM3P06753 DGCR10-201ENST00000609839 495 ntBASIC19.99■□□□□ 0.79
TPM3P06753 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TPM3P06753 HOXB1-202ENST00000577092 1414 ntBASIC19.99■□□□□ 0.79
TPM3P06753 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM3P06753 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM3P06753 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM3P06753 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TPM3P06753 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TPM3P06753 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TPM3P06753 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.98■□□□□ 0.79
TPM3P06753 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM3P06753 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.98■□□□□ 0.79
TPM3P06753 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms