Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND1P03886 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND1P03886 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND1P03886 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND1P03886 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.84■□□□□ 0.29
MT-ND1P03886 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.84■□□□□ 0.29
MT-ND1P03886 MIR3180-5-201ENST00000583743 153 ntBASIC16.84■□□□□ 0.29
MT-ND1P03886 REXO1L10P-201ENST00000615707 1290 ntBASIC16.84■□□□□ 0.29
MT-ND1P03886 REXO1L12P-201ENST00000622156 912 ntBASIC16.84■□□□□ 0.29
MT-ND1P03886 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND1P03886 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 AL138688.1-201ENST00000624851 1594 ntBASIC16.84■□□□□ 0.29
MT-ND1P03886 AL121761.2-201ENST00000598007 1648 ntBASIC16.84■□□□□ 0.29
MT-ND1P03886 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND1P03886 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND1P03886 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.83■□□□□ 0.29
MT-ND1P03886 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-ND1P03886 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-ND1P03886 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-ND1P03886 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-ND1P03886 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.83■□□□□ 0.28
MT-ND1P03886 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.83■□□□□ 0.28
MT-ND1P03886 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 AL355355.2-201ENST00000442321 338 ntBASIC16.83■□□□□ 0.28
MT-ND1P03886 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MT-ND1P03886 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 MIR4674-201ENST00000582457 87 ntBASIC16.83■□□□□ 0.28
MT-ND1P03886 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.83■□□□□ 0.28
MT-ND1P03886 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.83■□□□□ 0.28
MT-ND1P03886 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND1P03886 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 AC008741.2-201ENST00000612792 3115 ntBASIC16.83■□□□□ 0.28
MT-ND1P03886 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.83■□□□□ 0.28
MT-ND1P03886 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
MT-ND1P03886 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
MT-ND1P03886 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 PCDHB19P-201ENST00000570871 2371 ntBASIC16.82■□□□□ 0.28
MT-ND1P03886 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
MT-ND1P03886 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
MT-ND1P03886 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-ND1P03886 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MT-ND1P03886 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.82■□□□□ 0.28
MT-ND1P03886 AL024508.2-201ENST00000607749 1894 ntBASIC16.82■□□□□ 0.28
MT-ND1P03886 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MT-ND1P03886 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-ND1P03886 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MT-ND1P03886 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-ND1P03886 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.82■□□□□ 0.28
MT-ND1P03886 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-ND1P03886 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-ND1P03886 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MT-ND1P03886 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MT-ND1P03886 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
MT-ND1P03886 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms