Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRUB2O95900 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRUB2O95900 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.68■□□□□ 0.58
TRUB2O95900 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.68■□□□□ 0.58
TRUB2O95900 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.67■□□□□ 0.58
TRUB2O95900 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.67■□□□□ 0.58
TRUB2O95900 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.67■□□□□ 0.58
TRUB2O95900 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRUB2O95900 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.67■□□□□ 0.58
TRUB2O95900 VENTXP7-201ENST00000475503 772 ntBASIC18.67■□□□□ 0.58
TRUB2O95900 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.67■□□□□ 0.58
TRUB2O95900 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.67■□□□□ 0.58
TRUB2O95900 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.67■□□□□ 0.58
TRUB2O95900 AP005901.3-202ENST00000581653 237 ntBASIC18.67■□□□□ 0.58
TRUB2O95900 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.67■□□□□ 0.58
TRUB2O95900 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRUB2O95900 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.67■□□□□ 0.58
TRUB2O95900 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.67■□□□□ 0.58
TRUB2O95900 KRT8P47-201ENST00000604727 1398 ntBASIC18.67■□□□□ 0.58
TRUB2O95900 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB2O95900 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRUB2O95900 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRUB2O95900 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.66■□□□□ 0.58
TRUB2O95900 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
TRUB2O95900 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRUB2O95900 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.66■□□□□ 0.58
TRUB2O95900 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
TRUB2O95900 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
TRUB2O95900 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRUB2O95900 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TRUB2O95900 AP000867.3-201ENST00000524675 377 ntBASIC18.66■□□□□ 0.58
TRUB2O95900 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
TRUB2O95900 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.66■□□□□ 0.58
TRUB2O95900 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRUB2O95900 Z69720.1-201ENST00000601483 472 ntBASIC18.66■□□□□ 0.58
TRUB2O95900 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRUB2O95900 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.66■□□□□ 0.58
TRUB2O95900 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRUB2O95900 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.66■□□□□ 0.58
TRUB2O95900 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB2O95900 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.65■□□□□ 0.58
TRUB2O95900 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRUB2O95900 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRUB2O95900 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.65■□□□□ 0.58
TRUB2O95900 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRUB2O95900 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.65■□□□□ 0.58
TRUB2O95900 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.65■□□□□ 0.58
TRUB2O95900 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
TRUB2O95900 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRUB2O95900 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.65■□□□□ 0.58
TRUB2O95900 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.65■□□□□ 0.58
TRUB2O95900 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.65■□□□□ 0.58
TRUB2O95900 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.65■□□□□ 0.58
TRUB2O95900 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.65■□□□□ 0.58
TRUB2O95900 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.65■□□□□ 0.58
TRUB2O95900 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms