Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC26.5■■□□□ 1.83
RAPGEF3O95398 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC26.5■■□□□ 1.83
RAPGEF3O95398 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
RAPGEF3O95398 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF3O95398 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC26.5■■□□□ 1.83
RAPGEF3O95398 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF3O95398 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC26.5■■□□□ 1.83
RAPGEF3O95398 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF3O95398 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
RAPGEF3O95398 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF3O95398 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF3O95398 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF3O95398 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF3O95398 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC26.49■■□□□ 1.83
RAPGEF3O95398 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC26.49■■□□□ 1.83
RAPGEF3O95398 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF3O95398 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC26.49■■□□□ 1.83
RAPGEF3O95398 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.49■■□□□ 1.83
RAPGEF3O95398 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC26.49■■□□□ 1.83
RAPGEF3O95398 SLC25A39P2-201ENST00000537614 270 ntBASIC26.49■■□□□ 1.83
RAPGEF3O95398 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC26.49■■□□□ 1.83
RAPGEF3O95398 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC26.49■■□□□ 1.83
RAPGEF3O95398 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC26.49■■□□□ 1.83
RAPGEF3O95398 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF3O95398 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF3O95398 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RAPGEF3O95398 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF3O95398 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF3O95398 ESPNP-201ENST00000270691 2015 ntBASIC26.48■■□□□ 1.83
RAPGEF3O95398 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF3O95398 WRB-204ENST00000398753 699 ntTSL 3 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 FALEC-201ENST00000416894 566 ntTSL 3 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 AC022494.1-201ENST00000466044 728 ntBASIC26.48■■□□□ 1.83
RAPGEF3O95398 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF3O95398 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF3O95398 AL359881.2-201ENST00000602973 570 ntBASIC26.48■■□□□ 1.83
RAPGEF3O95398 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF3O95398 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF3O95398 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC26.48■■□□□ 1.83
RAPGEF3O95398 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 GOLGA6L11P-201ENST00000417252 1298 ntBASIC26.47■■□□□ 1.83
RAPGEF3O95398 AL671277.1-201ENST00000429656 993 ntBASIC26.47■■□□□ 1.83
RAPGEF3O95398 CRB3P1-201ENST00000449338 276 ntBASIC26.47■■□□□ 1.83
RAPGEF3O95398 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC26.47■■□□□ 1.83
RAPGEF3O95398 COX11-202ENST00000571584 1108 ntTSL 2 BASIC26.47■■□□□ 1.83
RAPGEF3O95398 AC109462.3-201ENST00000573934 613 ntBASIC26.47■■□□□ 1.83
RAPGEF3O95398 STK25P1-201ENST00000585406 838 ntBASIC26.47■■□□□ 1.83
RAPGEF3O95398 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC26.47■■□□□ 1.83
RAPGEF3O95398 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 AP001059.3-201ENST00000619053 235 ntBASIC26.47■■□□□ 1.83
RAPGEF3O95398 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC26.47■■□□□ 1.83
RAPGEF3O95398 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC26.47■■□□□ 1.83
RAPGEF3O95398 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
RAPGEF3O95398 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF3O95398 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC26.46■■□□□ 1.83
RAPGEF3O95398 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC26.46■■□□□ 1.83
RAPGEF3O95398 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RAPGEF3O95398 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RAPGEF3O95398 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAPGEF3O95398 TREML5P-201ENST00000421694 576 ntBASIC26.46■■□□□ 1.83
RAPGEF3O95398 AC107890.1-201ENST00000422478 521 ntBASIC26.46■■□□□ 1.83
RAPGEF3O95398 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC26.46■■□□□ 1.83
RAPGEF3O95398 AL513480.1-201ENST00000451731 511 ntBASIC26.46■■□□□ 1.83
RAPGEF3O95398 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC26.46■■□□□ 1.83
RAPGEF3O95398 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC26.46■■□□□ 1.83
RAPGEF3O95398 TMED1-207ENST00000591695 809 ntTSL 5 BASIC26.46■■□□□ 1.83
RAPGEF3O95398 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAPGEF3O95398 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC26.46■■□□□ 1.83
RAPGEF3O95398 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RAPGEF3O95398 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
RAPGEF3O95398 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RAPGEF3O95398 AL592309.1-201ENST00000443127 649 ntBASIC26.45■■□□□ 1.82
RAPGEF3O95398 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC26.45■■□□□ 1.82
RAPGEF3O95398 AC079140.1-201ENST00000508039 487 ntBASIC26.45■■□□□ 1.82
RAPGEF3O95398 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC26.45■■□□□ 1.82
RAPGEF3O95398 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC26.45■■□□□ 1.82
RAPGEF3O95398 AL390754.1-201ENST00000619088 582 ntBASIC26.45■■□□□ 1.82
RAPGEF3O95398 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC26.45■■□□□ 1.82
RAPGEF3O95398 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RAPGEF3O95398 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC26.45■■□□□ 1.82
RAPGEF3O95398 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RAPGEF3O95398 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms