Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SLC28A2O43868 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC28A2O43868 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC28A2O43868 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC28A2O43868 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC28A2O43868 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC28A2O43868 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SLC28A2O43868 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC28A2O43868 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC28A2O43868 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC28A2O43868 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC28A2O43868 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC28A2O43868 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC28A2O43868 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC28A2O43868 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC28A2O43868 PMS2P2-201ENST00000425039 1128 ntBASIC17.19■□□□□ 0.34
SLC28A2O43868 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC28A2O43868 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC28A2O43868 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC28A2O43868 AC024243.1-201ENST00000609234 778 ntBASIC17.19■□□□□ 0.34
SLC28A2O43868 AL773604.1-201ENST00000617417 272 ntBASIC17.19■□□□□ 0.34
SLC28A2O43868 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC28A2O43868 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 KRT8P50-201ENST00000562022 1438 ntBASIC17.19■□□□□ 0.34
SLC28A2O43868 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC28A2O43868 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 AC036111.1-201ENST00000533973 1582 ntBASIC17.19■□□□□ 0.34
SLC28A2O43868 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC28A2O43868 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC28A2O43868 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 REXO1L9P-201ENST00000604264 2108 ntBASIC17.18■□□□□ 0.34
SLC28A2O43868 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC28A2O43868 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC28A2O43868 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC28A2O43868 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 SAPCD2P3-201ENST00000455031 850 ntBASIC17.18■□□□□ 0.34
SLC28A2O43868 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 MIR4674-201ENST00000582457 87 ntBASIC17.18■□□□□ 0.34
SLC28A2O43868 AC099336.1-202ENST00000602961 463 ntBASIC17.18■□□□□ 0.34
SLC28A2O43868 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC28A2O43868 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 PCDHB18P-201ENST00000524813 2368 ntBASIC17.18■□□□□ 0.34
SLC28A2O43868 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC28A2O43868 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC28A2O43868 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A2O43868 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
SLC28A2O43868 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A2O43868 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC28A2O43868 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A2O43868 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A2O43868 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A2O43868 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC28A2O43868 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A2O43868 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC28A2O43868 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A2O43868 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A2O43868 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A2O43868 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC28A2O43868 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.17■□□□□ 0.34
SLC28A2O43868 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms