Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 SLC25A1P2-201ENST00000430693 912 ntBASIC16.51■□□□□ 0.23
TNFRSF11BO00300 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 MIR4651-201ENST00000582622 73 ntBASIC16.51■□□□□ 0.23
TNFRSF11BO00300 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.5■□□□□ 0.23
TNFRSF11BO00300 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 AC116407.2-201ENST00000613639 860 ntBASIC16.5■□□□□ 0.23
TNFRSF11BO00300 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFRSF11BO00300 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 AL355355.2-201ENST00000442321 338 ntBASIC16.49■□□□□ 0.23
TNFRSF11BO00300 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 CD99P1-205ENST00000527459 561 ntBASIC16.49■□□□□ 0.23
TNFRSF11BO00300 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 LINC01451-201ENST00000623792 534 ntBASIC16.49■□□□□ 0.23
TNFRSF11BO00300 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
TNFRSF11BO00300 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 ABHD17AP1-201ENST00000358206 933 ntBASIC16.48■□□□□ 0.23
TNFRSF11BO00300 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.48■□□□□ 0.23
TNFRSF11BO00300 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.48■□□□□ 0.23
TNFRSF11BO00300 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms