Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 CNN2P2-201ENST00000443536 909 ntBASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 CNN2P3-201ENST00000450201 906 ntBASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 AL136317.3-201ENST00000618497 906 ntBASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 AC004706.3-202ENST00000621574 984 ntBASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL6A6A6NMZ7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 RN7SL692P-201ENST00000464677 288 ntBASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 SPDYE22P-201ENST00000582158 798 ntBASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
COL6A6A6NMZ7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 AD001527.2-201ENST00000622994 785 ntBASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL6A6A6NMZ7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 BASP1P1-201ENST00000430708 665 ntBASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 TIMM8BP1-201ENST00000452384 211 ntBASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.96■□□□□ 0.14
COL6A6A6NMZ7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 AC003669.1-201ENST00000334569 611 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms