Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 AC124864.1-201ENST00000623408 392 ntBASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 AL353692.3-201ENST00000407031 1396 ntBASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 KRT89P-201ENST00000620027 1478 ntBASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 AC026396.1-201ENST00000419388 421 ntBASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 NUS1P1-201ENST00000446295 882 ntBASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 GUSBP12-201ENST00000513727 720 ntBASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
PTPDC1A2A3K4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 AC012615.1-201ENST00000565797 1299 ntBASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 AC111152.3-201ENST00000569699 673 ntBASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 AL592071.1-201ENST00000611956 408 ntBASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPDC1A2A3K4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 AC104819.1-201ENST00000504587 486 ntBASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 AC074051.2-201ENST00000565115 352 ntBASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 RN7SL510P-201ENST00000581311 263 ntBASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPDC1A2A3K4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms