Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC074386.1-202ENST00000463561 864 ntBASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 AC025580.3-201ENST00000617932 1424 ntBASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 OR7E47P-204ENST00000575924 449 ntBASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 GGTLC5P-201ENST00000617623 998 ntBASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RTCBQ9Y3I0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 AC018445.3-201ENST00000624177 1945 ntBASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 AP002414.1-201ENST00000391405 1147 ntBASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 AC019129.2-201ENST00000609837 1235 ntBASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
RTCBQ9Y3I0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 AC004449.1-201ENST00000564240 433 ntBASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 AC091812.2-201ENST00000619081 385 ntBASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RTCBQ9Y3I0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 AC109462.3-201ENST00000573934 613 ntBASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 AC004835.2-201ENST00000603762 682 ntBASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms