Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 CROCCP2-202ENST00000412962 2773 ntBASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 ECEL1P2-202ENST00000465689 757 ntBASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 NAPSB-206ENST00000562112 1266 ntBASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 FAM87A-204ENST00000613235 858 ntBASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 AC092865.7-201ENST00000641832 219 ntBASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 AC022898.2-201ENST00000616822 1312 ntBASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2BQ9UQN3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 AL157888.1-201ENST00000631930 593 ntBASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 AP001094.4-201ENST00000579008 2176 ntBASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 LINC00304-203ENST00000565008 1864 ntBASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHMP2BQ9UQN3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 AL138688.1-201ENST00000624851 1594 ntBASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 AC022211.2-201ENST00000585075 2527 ntBASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CHMP2BQ9UQN3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms