Protein–RNA interactions for Protein: Q9UK80

USP21, Ubiquitin carboxyl-terminal hydrolase 21, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP21Q9UK80 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP21Q9UK80 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP21Q9UK80 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC23.37■■□□□ 1.33
USP21Q9UK80 RBPMS2P1-201ENST00000437762 623 ntBASIC23.37■■□□□ 1.33
USP21Q9UK80 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.37■■□□□ 1.33
USP21Q9UK80 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.37■■□□□ 1.33
USP21Q9UK80 AL158211.3-201ENST00000607385 239 ntBASIC23.37■■□□□ 1.33
USP21Q9UK80 BSG-214ENST00000614867 960 ntTSL 3 BASIC23.37■■□□□ 1.33
USP21Q9UK80 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
USP21Q9UK80 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
USP21Q9UK80 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP21Q9UK80 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP21Q9UK80 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.36■■□□□ 1.33
USP21Q9UK80 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP21Q9UK80 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP21Q9UK80 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP21Q9UK80 AL499627.1-201ENST00000569373 2188 ntBASIC23.36■■□□□ 1.33
USP21Q9UK80 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
USP21Q9UK80 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP21Q9UK80 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
USP21Q9UK80 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC23.36■■□□□ 1.33
USP21Q9UK80 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC23.36■■□□□ 1.33
USP21Q9UK80 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP21Q9UK80 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP21Q9UK80 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP21Q9UK80 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
USP21Q9UK80 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.36■■□□□ 1.33
USP21Q9UK80 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
USP21Q9UK80 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.36■■□□□ 1.33
USP21Q9UK80 AC008677.1-201ENST00000519230 1561 ntBASIC23.35■■□□□ 1.33
USP21Q9UK80 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC23.35■■□□□ 1.33
USP21Q9UK80 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.35■■□□□ 1.33
USP21Q9UK80 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP21Q9UK80 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP21Q9UK80 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP21Q9UK80 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP21Q9UK80 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP21Q9UK80 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC23.35■■□□□ 1.33
USP21Q9UK80 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC23.35■■□□□ 1.33
USP21Q9UK80 KRT17P7-201ENST00000451704 1104 ntBASIC23.35■■□□□ 1.33
USP21Q9UK80 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC23.35■■□□□ 1.33
USP21Q9UK80 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP21Q9UK80 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC23.35■■□□□ 1.33
USP21Q9UK80 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP21Q9UK80 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP21Q9UK80 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP21Q9UK80 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.35■■□□□ 1.33
USP21Q9UK80 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.34■■□□□ 1.33
USP21Q9UK80 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP21Q9UK80 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
USP21Q9UK80 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP21Q9UK80 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP21Q9UK80 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP21Q9UK80 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.34■■□□□ 1.33
USP21Q9UK80 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.34■■□□□ 1.33
USP21Q9UK80 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC23.34■■□□□ 1.33
USP21Q9UK80 LINC00982-205ENST00000420957 435 ntBASIC23.34■■□□□ 1.33
USP21Q9UK80 U91328.1-201ENST00000437528 223 ntBASIC23.34■■□□□ 1.33
USP21Q9UK80 AC097493.3-201ENST00000509725 367 ntBASIC23.34■■□□□ 1.33
USP21Q9UK80 IGHV3-71-201ENST00000523324 359 ntBASIC23.34■■□□□ 1.33
USP21Q9UK80 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC23.34■■□□□ 1.33
USP21Q9UK80 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC23.34■■□□□ 1.33
USP21Q9UK80 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC23.34■■□□□ 1.33
USP21Q9UK80 AC243562.1-201ENST00000560672 389 ntBASIC23.34■■□□□ 1.33
USP21Q9UK80 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC23.34■■□□□ 1.33
USP21Q9UK80 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP21Q9UK80 ACTL9-202ENST00000612068 1252 ntBASIC23.34■■□□□ 1.33
USP21Q9UK80 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.34■■□□□ 1.33
USP21Q9UK80 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP21Q9UK80 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP21Q9UK80 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP21Q9UK80 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
USP21Q9UK80 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
USP21Q9UK80 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.33■■□□□ 1.33
USP21Q9UK80 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.33■■□□□ 1.33
USP21Q9UK80 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
USP21Q9UK80 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.33■■□□□ 1.33
USP21Q9UK80 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 TDG-209ENST00000544861 1387 ntTSL 2 BASIC23.33■■□□□ 1.33
USP21Q9UK80 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC23.33■■□□□ 1.33
USP21Q9UK80 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC23.33■■□□□ 1.33
USP21Q9UK80 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC23.33■■□□□ 1.33
USP21Q9UK80 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
USP21Q9UK80 RN7SL589P-201ENST00000481268 310 ntBASIC23.33■■□□□ 1.33
USP21Q9UK80 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC23.33■■□□□ 1.33
USP21Q9UK80 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC23.33■■□□□ 1.33
USP21Q9UK80 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC23.33■■□□□ 1.33
USP21Q9UK80 RPL28-209ENST00000560055 670 ntTSL 3 BASIC23.33■■□□□ 1.33
USP21Q9UK80 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC23.33■■□□□ 1.33
USP21Q9UK80 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP21Q9UK80 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.33■■□□□ 1.33
USP21Q9UK80 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms