Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 AC073508.3-201ENST00000619697 1419 ntBASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 AC005521.1-201ENST00000393351 872 ntBASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 AC104390.1-201ENST00000555663 520 ntBASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 WWOX-216ENST00000569818 525 ntBASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VTI1BQ9UEU0 AC124067.4-201ENST00000519691 2379 ntBASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 TERF1P1-201ENST00000311003 1181 ntBASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 AC010203.1-204ENST00000548782 407 ntBASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 AL138966.2-201ENST00000621997 464 ntBASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 AC084018.2-201ENST00000613093 2607 ntBASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VTI1BQ9UEU0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 AC022211.2-201ENST00000585075 2527 ntBASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VTI1BQ9UEU0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms