Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 FAM197Y4-202ENST00000622692 608 ntBASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 LINC00554-201ENST00000564841 3011 ntBASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 AC060834.1-201ENST00000443027 2032 ntBASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 AC036111.1-201ENST00000533973 1582 ntBASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
SPTLC3Q9NUV7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPTLC3Q9NUV7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
SPTLC3Q9NUV7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPTLC3Q9NUV7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.64■□□□□ 0.74
SPTLC3Q9NUV7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPTLC3Q9NUV7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
SPTLC3Q9NUV7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SPTLC3Q9NUV7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 AL163051.1-201ENST00000569214 1512 ntBASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SPTLC3Q9NUV7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms