Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 NIFKP9-201ENST00000419265 221 ntBASIC17■□□□□ 0.31
CCM2LQ9NUG4 KSR1P1-201ENST00000446298 240 ntBASIC17■□□□□ 0.31
CCM2LQ9NUG4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 AC008622.2-201ENST00000617006 1229 ntBASIC17■□□□□ 0.31
CCM2LQ9NUG4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 AL163051.1-201ENST00000569214 1512 ntBASIC17■□□□□ 0.31
CCM2LQ9NUG4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCM2LQ9NUG4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCM2LQ9NUG4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 KRT16P1-201ENST00000399124 1418 ntBASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 MIR149-201ENST00000384879 89 ntBASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 AL121894.2-201ENST00000602977 491 ntBASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 AC091076.1-201ENST00000610741 619 ntBASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 AL358472.4-201ENST00000633140 710 ntBASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCM2LQ9NUG4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 AC004951.3-201ENST00000418645 1148 ntBASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 TPM4P1-201ENST00000436100 807 ntBASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.98■□□□□ 0.31
CCM2LQ9NUG4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms