Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 BICD1-207ENST00000551848 1962 ntBASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPCPD1Q9NPB8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPCPD1Q9NPB8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 ABCD1P5-201ENST00000445663 754 ntBASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 FAM197Y8-203ENST00000450145 560 ntBASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 FGFR3P6-201ENST00000457012 610 ntBASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 SLC25A6P4-201ENST00000586535 553 ntBASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 AL355877.3-201ENST00000622820 899 ntBASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPCPD1Q9NPB8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 AP005117.1-201ENST00000584346 1413 ntBASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 AC009949.1-201ENST00000623048 1830 ntBASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 AC106795.1-205ENST00000512851 1056 ntBASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 ABALON-201ENST00000629058 1903 ntBASIC20.63■□□□□ 0.89
GPCPD1Q9NPB8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPCPD1Q9NPB8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms