Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 PMPCAP1-201ENST00000508114 1576 ntBASIC18.46■□□□□ 0.55
RNF38Q9H0F5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 RPS2P1-201ENST00000434010 821 ntBASIC18.45■□□□□ 0.54
RNF38Q9H0F5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 MIR7706-201ENST00000613747 67 ntBASIC18.45■□□□□ 0.54
RNF38Q9H0F5 AF228730.7-201ENST00000641842 219 ntBASIC18.45■□□□□ 0.54
RNF38Q9H0F5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF38Q9H0F5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 SLC25A1P1-201ENST00000528351 927 ntBASIC18.44■□□□□ 0.54
RNF38Q9H0F5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 AL671883.3-201ENST00000603274 991 ntBASIC18.44■□□□□ 0.54
RNF38Q9H0F5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.44■□□□□ 0.54
RNF38Q9H0F5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF38Q9H0F5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 AC025062.2-201ENST00000605477 670 ntBASIC18.43■□□□□ 0.54
RNF38Q9H0F5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 AC116407.3-201ENST00000623905 1129 ntBASIC18.43■□□□□ 0.54
RNF38Q9H0F5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF38Q9H0F5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms