Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN18Q99952 HLA-J-202ENST00000469281 1241 ntBASIC20.31■□□□□ 0.84
PTPN18Q99952 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.31■□□□□ 0.84
PTPN18Q99952 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN18Q99952 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN18Q99952 AL353135.1-201ENST00000606729 504 ntBASIC20.31■□□□□ 0.84
PTPN18Q99952 GGTLC5P-201ENST00000617623 998 ntBASIC20.31■□□□□ 0.84
PTPN18Q99952 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PTPN18Q99952 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN18Q99952 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PTPN18Q99952 ANO7L1-203ENST00000602586 1720 ntBASIC20.3■□□□□ 0.84
PTPN18Q99952 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN18Q99952 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN18Q99952 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 AC018445.3-201ENST00000624177 1945 ntBASIC20.3■□□□□ 0.84
PTPN18Q99952 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN18Q99952 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN18Q99952 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 AC023141.5-201ENST00000458585 616 ntBASIC20.3■□□□□ 0.84
PTPN18Q99952 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN18Q99952 DUTP2-201ENST00000519164 463 ntBASIC20.3■□□□□ 0.84
PTPN18Q99952 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PTPN18Q99952 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN18Q99952 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 REXO1L3P-201ENST00000622202 1288 ntBASIC20.3■□□□□ 0.84
PTPN18Q99952 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 PHGDH-209ENST00000641074 1780 ntBASIC20.3■□□□□ 0.84
PTPN18Q99952 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PTPN18Q99952 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN18Q99952 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN18Q99952 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN18Q99952 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PTPN18Q99952 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
PTPN18Q99952 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 AC097637.2-201ENST00000624096 1997 ntBASIC20.29■□□□□ 0.84
PTPN18Q99952 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN18Q99952 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.29■□□□□ 0.84
PTPN18Q99952 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.29■□□□□ 0.84
PTPN18Q99952 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.29■□□□□ 0.84
PTPN18Q99952 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 AC069262.1-201ENST00000539058 672 ntBASIC20.29■□□□□ 0.84
PTPN18Q99952 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.29■□□□□ 0.84
PTPN18Q99952 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 AF228730.6-201ENST00000641497 218 ntBASIC20.29■□□□□ 0.84
PTPN18Q99952 AC084121.3-201ENST00000641716 218 ntBASIC20.29■□□□□ 0.84
PTPN18Q99952 AC105233.6-201ENST00000642093 218 ntBASIC20.29■□□□□ 0.84
PTPN18Q99952 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
PTPN18Q99952 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN18Q99952 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PTPN18Q99952 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
PTPN18Q99952 AC092919.2-201ENST00000623631 1645 ntBASIC20.28■□□□□ 0.84
PTPN18Q99952 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN18Q99952 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN18Q99952 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN18Q99952 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN18Q99952 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PTPN18Q99952 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
PTPN18Q99952 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.28■□□□□ 0.84
PTPN18Q99952 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN18Q99952 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN18Q99952 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN18Q99952 Z92544.3-201ENST00000624747 417 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms