Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.94□□□□□ -0.18
TRGV9Q99603 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 AC080080.1-201ENST00000625121 2420 ntBASIC13.94□□□□□ -0.18
TRGV9Q99603 AD000864.1-201ENST00000624076 2295 ntBASIC13.94□□□□□ -0.18
TRGV9Q99603 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRGV9Q99603 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
TRGV9Q99603 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.93□□□□□ -0.18
TRGV9Q99603 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRGV9Q99603 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TRGV9Q99603 HMGA1P5-201ENST00000412453 271 ntBASIC13.93□□□□□ -0.18
TRGV9Q99603 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.93□□□□□ -0.18
TRGV9Q99603 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
TRGV9Q99603 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.93□□□□□ -0.18
TRGV9Q99603 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRGV9Q99603 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRGV9Q99603 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRGV9Q99603 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRGV9Q99603 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV9Q99603 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 OR6D1P-203ENST00000641209 4860 ntBASIC13.92□□□□□ -0.18
TRGV9Q99603 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV9Q99603 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 INGX-201ENST00000359239 846 ntBASIC13.92□□□□□ -0.18
TRGV9Q99603 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 KRT18P65-201ENST00000439811 1286 ntBASIC13.92□□□□□ -0.18
TRGV9Q99603 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
TRGV9Q99603 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV9Q99603 AL355075.4-201ENST00000554988 638 ntBASIC13.92□□□□□ -0.18
TRGV9Q99603 NAPSB-206ENST00000562112 1266 ntBASIC13.92□□□□□ -0.18
TRGV9Q99603 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.92□□□□□ -0.18
TRGV9Q99603 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.92□□□□□ -0.18
TRGV9Q99603 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.92□□□□□ -0.18
TRGV9Q99603 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.92□□□□□ -0.18
TRGV9Q99603 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 AC009949.1-201ENST00000623048 1830 ntBASIC13.92□□□□□ -0.18
TRGV9Q99603 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV9Q99603 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV9Q99603 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.92□□□□□ -0.18
TRGV9Q99603 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRGV9Q99603 PCDHA12-202ENST00000613593 2588 ntBASIC13.91□□□□□ -0.18
TRGV9Q99603 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.91□□□□□ -0.18
TRGV9Q99603 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.91□□□□□ -0.18
TRGV9Q99603 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
TRGV9Q99603 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV9Q99603 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV9Q99603 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV9Q99603 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms