Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPTSSAQ969W0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 LINC00896-202ENST00000609602 2128 ntBASIC15.66■□□□□ 0.1
SPTSSAQ969W0 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.66■□□□□ 0.1
SPTSSAQ969W0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.66■□□□□ 0.1
SPTSSAQ969W0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 TSPY12P-201ENST00000421279 868 ntBASIC15.65■□□□□ 0.1
SPTSSAQ969W0 AP003733.1-201ENST00000491725 852 ntBASIC15.65■□□□□ 0.1
SPTSSAQ969W0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.65■□□□□ 0.1
SPTSSAQ969W0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 AC009154.2-201ENST00000621177 724 ntBASIC15.65■□□□□ 0.1
SPTSSAQ969W0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPTSSAQ969W0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.64■□□□□ 0.1
SPTSSAQ969W0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
SPTSSAQ969W0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPTSSAQ969W0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPTSSAQ969W0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms