Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GCN1Q92616 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GCN1Q92616 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GCN1Q92616 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GCN1Q92616 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GCN1Q92616 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.4■□□□□ 0.06
GCN1Q92616 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GCN1Q92616 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GCN1Q92616 AC104457.1-201ENST00000401024 814 ntBASIC15.4■□□□□ 0.06
GCN1Q92616 FEM1AP3-201ENST00000403722 1741 ntBASIC15.4■□□□□ 0.06
GCN1Q92616 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.4■□□□□ 0.06
GCN1Q92616 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GCN1Q92616 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GCN1Q92616 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.4■□□□□ 0.06
GCN1Q92616 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.4■□□□□ 0.06
GCN1Q92616 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.4■□□□□ 0.06
GCN1Q92616 ALG1L8P-201ENST00000533887 760 ntBASIC15.4■□□□□ 0.06
GCN1Q92616 AL590560.3-201ENST00000623350 461 ntBASIC15.4■□□□□ 0.06
GCN1Q92616 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.39■□□□□ 0.05
GCN1Q92616 TEX21P-204ENST00000641479 1693 ntBASIC15.39■□□□□ 0.05
GCN1Q92616 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
GCN1Q92616 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
GCN1Q92616 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.39■□□□□ 0.05
GCN1Q92616 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 BRWD1P1-201ENST00000401091 371 ntBASIC15.39■□□□□ 0.05
GCN1Q92616 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.39■□□□□ 0.05
GCN1Q92616 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 SPCS2P4-201ENST00000436160 681 ntBASIC15.39■□□□□ 0.05
GCN1Q92616 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.39■□□□□ 0.05
GCN1Q92616 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.39■□□□□ 0.05
GCN1Q92616 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.39■□□□□ 0.05
GCN1Q92616 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.39■□□□□ 0.05
GCN1Q92616 MIR6080-201ENST00000617359 66 ntBASIC15.39■□□□□ 0.05
GCN1Q92616 MIR6775-201ENST00000617557 69 ntBASIC15.39■□□□□ 0.05
GCN1Q92616 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.39■□□□□ 0.05
GCN1Q92616 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
GCN1Q92616 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 AL355334.1-201ENST00000417713 215 ntBASIC15.39■□□□□ 0.05
GCN1Q92616 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 AC009407.1-201ENST00000568958 598 ntBASIC15.39■□□□□ 0.05
GCN1Q92616 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.39■□□□□ 0.05
GCN1Q92616 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.39■□□□□ 0.05
GCN1Q92616 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GCN1Q92616 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.38■□□□□ 0.05
GCN1Q92616 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.38■□□□□ 0.05
GCN1Q92616 AC092978.1-202ENST00000637590 1327 ntBASIC15.38■□□□□ 0.05
GCN1Q92616 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
GCN1Q92616 PTCHD3P3-201ENST00000403073 906 ntBASIC15.38■□□□□ 0.05
GCN1Q92616 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.38■□□□□ 0.05
GCN1Q92616 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
GCN1Q92616 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.38■□□□□ 0.05
GCN1Q92616 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.38■□□□□ 0.05
GCN1Q92616 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.38■□□□□ 0.05
GCN1Q92616 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.38■□□□□ 0.05
GCN1Q92616 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.38■□□□□ 0.05
GCN1Q92616 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.38■□□□□ 0.05
GCN1Q92616 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
GCN1Q92616 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
GCN1Q92616 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
GCN1Q92616 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
GCN1Q92616 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GCN1Q92616 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.38■□□□□ 0.05
GCN1Q92616 RPS2P36-201ENST00000456516 831 ntBASIC15.38■□□□□ 0.05
GCN1Q92616 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms