Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA6Q8N139 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA6Q8N139 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA6Q8N139 STK19B-204ENST00000512515 211 ntBASIC26.21■■□□□ 1.79
ABCA6Q8N139 TMED1-207ENST00000591695 809 ntTSL 5 BASIC26.21■■□□□ 1.79
ABCA6Q8N139 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC26.21■■□□□ 1.79
ABCA6Q8N139 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC26.21■■□□□ 1.79
ABCA6Q8N139 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
ABCA6Q8N139 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
ABCA6Q8N139 AL121761.2-201ENST00000598007 1648 ntBASIC26.2■■□□□ 1.78
ABCA6Q8N139 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ABCA6Q8N139 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
ABCA6Q8N139 BSG-215ENST00000618006 1329 ntTSL 2 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 AL355306.1-201ENST00000415580 579 ntBASIC26.2■■□□□ 1.78
ABCA6Q8N139 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 TAF8-206ENST00000472818 719 ntTSL 2 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ABCA6Q8N139 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
ABCA6Q8N139 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 SP100-208ENST00000427101 1922 ntTSL 2 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA6Q8N139 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 AC051619.7-201ENST00000568314 623 ntBASIC26.19■■□□□ 1.78
ABCA6Q8N139 ACTL9-202ENST00000612068 1252 ntBASIC26.19■■□□□ 1.78
ABCA6Q8N139 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 REXO1L3P-201ENST00000622202 1288 ntBASIC26.19■■□□□ 1.78
ABCA6Q8N139 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA6Q8N139 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA6Q8N139 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC26.19■■□□□ 1.78
ABCA6Q8N139 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA6Q8N139 REM2-202ENST00000536884 1331 ntTSL 2 BASIC26.18■■□□□ 1.78
ABCA6Q8N139 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA6Q8N139 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC26.18■■□□□ 1.78
ABCA6Q8N139 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC26.18■■□□□ 1.78
ABCA6Q8N139 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
ABCA6Q8N139 AC100803.2-201ENST00000562459 1963 ntBASIC26.18■■□□□ 1.78
ABCA6Q8N139 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA6Q8N139 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA6Q8N139 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA6Q8N139 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA6Q8N139 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC26.18■■□□□ 1.78
ABCA6Q8N139 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
ABCA6Q8N139 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC26.18■■□□□ 1.78
ABCA6Q8N139 PC-208ENST00000529047 1607 ntTSL 3 BASIC26.18■■□□□ 1.78
ABCA6Q8N139 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA6Q8N139 NMU-203ENST00000507338 658 ntTSL 3 BASIC26.17■■□□□ 1.78
ABCA6Q8N139 NAA60-208ENST00000570819 833 ntTSL 2 BASIC26.17■■□□□ 1.78
ABCA6Q8N139 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC26.17■■□□□ 1.78
ABCA6Q8N139 CYP51A1P2-201ENST00000419457 1499 ntBASIC26.17■■□□□ 1.78
ABCA6Q8N139 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA6Q8N139 PTGES2-AS1-201ENST00000443493 2100 ntBASIC26.17■■□□□ 1.78
ABCA6Q8N139 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC26.17■■□□□ 1.78
ABCA6Q8N139 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA6Q8N139 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA6Q8N139 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
ABCA6Q8N139 METTL26-204ENST00000397665 558 ntTSL 2 BASIC26.17■■□□□ 1.78
ABCA6Q8N139 HLA-DRB6-201ENST00000411500 1235 ntBASIC26.17■■□□□ 1.78
ABCA6Q8N139 LINC00982-205ENST00000420957 435 ntBASIC26.17■■□□□ 1.78
ABCA6Q8N139 AC015922.1-201ENST00000421102 1152 ntBASIC26.17■■□□□ 1.78
ABCA6Q8N139 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC26.17■■□□□ 1.78
ABCA6Q8N139 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA6Q8N139 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA6Q8N139 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC26.17■■□□□ 1.78
ABCA6Q8N139 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC26.17■■□□□ 1.78
ABCA6Q8N139 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC26.16■■□□□ 1.78
ABCA6Q8N139 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
ABCA6Q8N139 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC26.16■■□□□ 1.78
ABCA6Q8N139 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 AC236430.1-201ENST00000402231 743 ntBASIC26.16■■□□□ 1.78
ABCA6Q8N139 FALEC-201ENST00000416894 566 ntTSL 3 BASIC26.16■■□□□ 1.78
ABCA6Q8N139 ACTG1P4-201ENST00000425123 1122 ntBASIC26.16■■□□□ 1.78
ABCA6Q8N139 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 AC067863.1-201ENST00000494933 530 ntBASIC26.16■■□□□ 1.78
ABCA6Q8N139 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 AC025678.2-201ENST00000562061 970 ntBASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms