Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 FAM197Y4-202ENST00000622692 608 ntBASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 CR769767.2-201ENST00000622735 460 ntBASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 HLA-J-201ENST00000462773 1622 ntBASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 AL135905.2-201ENST00000584934 1404 ntBASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 WWOX-216ENST00000569818 525 ntBASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 AC112497.1-201ENST00000624824 639 ntBASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 PKD1P5-201ENST00000532415 10291 ntBASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUDCD3Q8IVD9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms