Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2NP61088 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
UBE2NP61088 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2NP61088 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UBE2NP61088 MINOS1P3-201ENST00000457048 203 ntBASIC15.7■□□□□ 0.1
UBE2NP61088 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
UBE2NP61088 DUTP2-201ENST00000519164 463 ntBASIC15.7■□□□□ 0.1
UBE2NP61088 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.7■□□□□ 0.1
UBE2NP61088 AC074051.2-201ENST00000565115 352 ntBASIC15.7■□□□□ 0.1
UBE2NP61088 MIR3180-1-201ENST00000580374 94 ntBASIC15.7■□□□□ 0.1
UBE2NP61088 MIR3180-3-201ENST00000584616 94 ntBASIC15.7■□□□□ 0.1
UBE2NP61088 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2NP61088 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.7■□□□□ 0.1
UBE2NP61088 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2NP61088 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2NP61088 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
UBE2NP61088 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
UBE2NP61088 AC233702.3-201ENST00000578656 1387 ntBASIC15.7■□□□□ 0.1
UBE2NP61088 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
UBE2NP61088 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2NP61088 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2NP61088 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 ABALON-201ENST00000629058 1903 ntBASIC15.7■□□□□ 0.1
UBE2NP61088 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
UBE2NP61088 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2NP61088 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
UBE2NP61088 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2NP61088 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
UBE2NP61088 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
UBE2NP61088 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.69■□□□□ 0.1
UBE2NP61088 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2NP61088 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
UBE2NP61088 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2NP61088 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.69■□□□□ 0.1
UBE2NP61088 AC112698.1-201ENST00000510299 916 ntBASIC15.69■□□□□ 0.1
UBE2NP61088 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.69■□□□□ 0.1
UBE2NP61088 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 AC012615.1-201ENST00000565797 1299 ntBASIC15.69■□□□□ 0.1
UBE2NP61088 PRELID1P1-202ENST00000567272 903 ntBASIC15.69■□□□□ 0.1
UBE2NP61088 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBE2NP61088 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.69■□□□□ 0.1
UBE2NP61088 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2NP61088 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
UBE2NP61088 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2NP61088 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2NP61088 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2NP61088 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2NP61088 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
UBE2NP61088 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2NP61088 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2NP61088 KRT17P6-201ENST00000453795 1220 ntBASIC15.68■□□□□ 0.1
UBE2NP61088 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.68■□□□□ 0.1
UBE2NP61088 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.68■□□□□ 0.1
UBE2NP61088 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.68■□□□□ 0.1
UBE2NP61088 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
UBE2NP61088 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
UBE2NP61088 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms