Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CENPFP49454 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.98■□□□□ 0.79
CENPFP49454 MIR6752-201ENST00000618442 71 ntBASIC19.98■□□□□ 0.79
CENPFP49454 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.98■□□□□ 0.79
CENPFP49454 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CENPFP49454 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CENPFP49454 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CENPFP49454 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
CENPFP49454 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.98■□□□□ 0.79
CENPFP49454 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
CENPFP49454 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.98■□□□□ 0.79
CENPFP49454 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.98■□□□□ 0.79
CENPFP49454 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CENPFP49454 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.98■□□□□ 0.79
CENPFP49454 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.98■□□□□ 0.79
CENPFP49454 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CENPFP49454 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CENPFP49454 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CENPFP49454 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPFP49454 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.97■□□□□ 0.79
CENPFP49454 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.97■□□□□ 0.79
CENPFP49454 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 AC025678.2-201ENST00000562061 970 ntBASIC19.97■□□□□ 0.79
CENPFP49454 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 AC008687.5-201ENST00000593746 558 ntBASIC19.97■□□□□ 0.79
CENPFP49454 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CENPFP49454 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CENPFP49454 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 TERF1P3-201ENST00000505638 1227 ntBASIC19.97■□□□□ 0.79
CENPFP49454 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CENPFP49454 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.97■□□□□ 0.79
CENPFP49454 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CENPFP49454 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CENPFP49454 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.97■□□□□ 0.79
CENPFP49454 FAM86GP-201ENST00000448322 971 ntBASIC19.97■□□□□ 0.79
CENPFP49454 INGX-202ENST00000489074 768 ntBASIC19.97■□□□□ 0.79
CENPFP49454 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CENPFP49454 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CENPFP49454 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.97■□□□□ 0.79
CENPFP49454 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPFP49454 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.96■□□□□ 0.79
CENPFP49454 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPFP49454 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPFP49454 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CENPFP49454 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CENPFP49454 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CENPFP49454 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.96■□□□□ 0.79
CENPFP49454 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.96■□□□□ 0.79
CENPFP49454 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.96■□□□□ 0.79
CENPFP49454 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.96■□□□□ 0.79
CENPFP49454 AC004835.2-201ENST00000603762 682 ntBASIC19.96■□□□□ 0.79
CENPFP49454 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.96■□□□□ 0.79
CENPFP49454 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPFP49454 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.96■□□□□ 0.79
CENPFP49454 MYLKP1-201ENST00000509077 1580 ntBASIC19.96■□□□□ 0.79
CENPFP49454 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.96■□□□□ 0.79
CENPFP49454 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.96■□□□□ 0.79
CENPFP49454 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPFP49454 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CENPFP49454 AC096633.1-201ENST00000422446 749 ntBASIC19.96■□□□□ 0.79
CENPFP49454 FAM58DP-201ENST00000428076 619 ntBASIC19.96■□□□□ 0.79
CENPFP49454 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.96■□□□□ 0.79
CENPFP49454 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CENPFP49454 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.96■□□□□ 0.79
CENPFP49454 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.96■□□□□ 0.79
CENPFP49454 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CENPFP49454 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.95■□□□□ 0.78
CENPFP49454 AC004790.2-201ENST00000623588 572 ntBASIC19.95■□□□□ 0.78
CENPFP49454 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms