Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AL023973.1-201ENST00000624619 620 ntBASIC17.34■□□□□ 0.37
KRT6CP48668 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT6CP48668 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
KRT6CP48668 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KRT6CP48668 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.33■□□□□ 0.37
KRT6CP48668 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.33■□□□□ 0.37
KRT6CP48668 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
KRT6CP48668 AC100803.2-201ENST00000562459 1963 ntBASIC17.33■□□□□ 0.37
KRT6CP48668 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT6CP48668 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.33■□□□□ 0.37
KRT6CP48668 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
KRT6CP48668 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT6CP48668 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.33■□□□□ 0.37
KRT6CP48668 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT6CP48668 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6CP48668 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT6CP48668 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6CP48668 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.33■□□□□ 0.36
KRT6CP48668 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT6CP48668 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
KRT6CP48668 RASA4DP-201ENST00000460726 1199 ntBASIC17.33■□□□□ 0.36
KRT6CP48668 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KRT6CP48668 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
KRT6CP48668 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
KRT6CP48668 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT6CP48668 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.33■□□□□ 0.36
KRT6CP48668 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.33■□□□□ 0.36
KRT6CP48668 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6CP48668 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KRT6CP48668 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6CP48668 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KRT6CP48668 AL139384.1-201ENST00000612143 3047 ntBASIC17.33■□□□□ 0.36
KRT6CP48668 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT6CP48668 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
KRT6CP48668 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KRT6CP48668 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
KRT6CP48668 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT6CP48668 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.32■□□□□ 0.36
KRT6CP48668 COX11P1-201ENST00000489116 835 ntBASIC17.32■□□□□ 0.36
KRT6CP48668 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
KRT6CP48668 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT6CP48668 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KRT6CP48668 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KRT6CP48668 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT6CP48668 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT6CP48668 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
KRT6CP48668 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KRT6CP48668 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT6CP48668 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6CP48668 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT6CP48668 KRT18P65-201ENST00000439811 1286 ntBASIC17.31■□□□□ 0.36
KRT6CP48668 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT6CP48668 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6CP48668 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6CP48668 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6CP48668 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6CP48668 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT6CP48668 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT6CP48668 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT6CP48668 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6CP48668 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT6CP48668 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT6CP48668 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT6CP48668 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT6CP48668 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
KRT6CP48668 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms