Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.08■□□□□ 0.49
HADHAP40939 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
HADHAP40939 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.49
HADHAP40939 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HADHAP40939 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 AP003733.1-201ENST00000491725 852 ntBASIC18.08■□□□□ 0.48
HADHAP40939 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.08■□□□□ 0.48
HADHAP40939 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.08■□□□□ 0.48
HADHAP40939 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.08■□□□□ 0.48
HADHAP40939 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.08■□□□□ 0.48
HADHAP40939 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HADHAP40939 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.08■□□□□ 0.48
HADHAP40939 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.08■□□□□ 0.48
HADHAP40939 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HADHAP40939 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HADHAP40939 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HADHAP40939 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.08■□□□□ 0.48
HADHAP40939 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HADHAP40939 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.07■□□□□ 0.48
HADHAP40939 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 AC022898.2-201ENST00000616822 1312 ntBASIC18.07■□□□□ 0.48
HADHAP40939 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.07■□□□□ 0.48
HADHAP40939 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HADHAP40939 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
HADHAP40939 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.07■□□□□ 0.48
HADHAP40939 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.07■□□□□ 0.48
HADHAP40939 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.07■□□□□ 0.48
HADHAP40939 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.07■□□□□ 0.48
HADHAP40939 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.07■□□□□ 0.48
HADHAP40939 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.07■□□□□ 0.48
HADHAP40939 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 LTB4R2-202ENST00000528054 3092 ntBASIC18.07■□□□□ 0.48
HADHAP40939 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.07■□□□□ 0.48
HADHAP40939 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
HADHAP40939 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HADHAP40939 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
HADHAP40939 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HADHAP40939 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.07■□□□□ 0.48
HADHAP40939 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HADHAP40939 LINC00602-201ENST00000629776 2065 ntBASIC18.07■□□□□ 0.48
HADHAP40939 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HADHAP40939 LINC00167-201ENST00000530583 1419 ntBASIC18.06■□□□□ 0.48
HADHAP40939 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HADHAP40939 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HADHAP40939 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HADHAP40939 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.06■□□□□ 0.48
HADHAP40939 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.06■□□□□ 0.48
HADHAP40939 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.06■□□□□ 0.48
HADHAP40939 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.06■□□□□ 0.48
HADHAP40939 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.06■□□□□ 0.48
HADHAP40939 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.06■□□□□ 0.48
HADHAP40939 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 AC083849.1-201ENST00000615227 514 ntBASIC18.06■□□□□ 0.48
HADHAP40939 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
HADHAP40939 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HADHAP40939 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms