Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GDNFP39905 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GDNFP39905 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
GDNFP39905 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GDNFP39905 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GDNFP39905 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GDNFP39905 PCDHB19P-201ENST00000570871 2371 ntBASIC15.58■□□□□ 0.09
GDNFP39905 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
GDNFP39905 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
GDNFP39905 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GDNFP39905 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
GDNFP39905 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
GDNFP39905 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 MIR718-201ENST00000390190 70 ntBASIC15.58■□□□□ 0.08
GDNFP39905 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
GDNFP39905 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 AP003071.4-201ENST00000562276 1284 ntBASIC15.58■□□□□ 0.08
GDNFP39905 CKBP1-201ENST00000565489 1086 ntBASIC15.58■□□□□ 0.08
GDNFP39905 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.58■□□□□ 0.08
GDNFP39905 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.58■□□□□ 0.08
GDNFP39905 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.58■□□□□ 0.08
GDNFP39905 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GDNFP39905 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GDNFP39905 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.58■□□□□ 0.08
GDNFP39905 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.58■□□□□ 0.08
GDNFP39905 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GDNFP39905 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.58■□□□□ 0.08
GDNFP39905 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.58■□□□□ 0.08
GDNFP39905 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.58■□□□□ 0.08
GDNFP39905 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDNFP39905 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
GDNFP39905 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GDNFP39905 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.57■□□□□ 0.08
GDNFP39905 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.57■□□□□ 0.08
GDNFP39905 SLC25A1P4-201ENST00000567977 778 ntBASIC15.57■□□□□ 0.08
GDNFP39905 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.57■□□□□ 0.08
GDNFP39905 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.57■□□□□ 0.08
GDNFP39905 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
GDNFP39905 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.57■□□□□ 0.08
GDNFP39905 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.57■□□□□ 0.08
GDNFP39905 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.57■□□□□ 0.08
GDNFP39905 AP006294.2-201ENST00000641667 209 ntBASIC15.57■□□□□ 0.08
GDNFP39905 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.57■□□□□ 0.08
GDNFP39905 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.57■□□□□ 0.08
GDNFP39905 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.57■□□□□ 0.08
GDNFP39905 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GDNFP39905 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 PCDH8P1-201ENST00000428983 2773 ntBASIC15.57■□□□□ 0.08
GDNFP39905 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
GDNFP39905 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.57■□□□□ 0.08
GDNFP39905 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
GDNFP39905 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
GDNFP39905 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDNFP39905 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.56■□□□□ 0.08
GDNFP39905 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDNFP39905 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDNFP39905 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GDNFP39905 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDNFP39905 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDNFP39905 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.56■□□□□ 0.08
GDNFP39905 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDNFP39905 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
GDNFP39905 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms