Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCKBRP32239 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
CCKBRP32239 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCKBRP32239 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCKBRP32239 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCKBRP32239 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCKBRP32239 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCKBRP32239 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCKBRP32239 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCKBRP32239 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.13■□□□□ 0.33
CCKBRP32239 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCKBRP32239 MIR940-201ENST00000401276 94 ntBASIC17.13■□□□□ 0.33
CCKBRP32239 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.13■□□□□ 0.33
CCKBRP32239 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.13■□□□□ 0.33
CCKBRP32239 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.13■□□□□ 0.33
CCKBRP32239 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.13■□□□□ 0.33
CCKBRP32239 FAM197Y3-203ENST00000618346 717 ntBASIC17.13■□□□□ 0.33
CCKBRP32239 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.13■□□□□ 0.33
CCKBRP32239 AC008735.5-201ENST00000623544 497 ntBASIC17.13■□□□□ 0.33
CCKBRP32239 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCKBRP32239 AC097374.2-201ENST00000618617 1306 ntBASIC17.13■□□□□ 0.33
CCKBRP32239 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCKBRP32239 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCKBRP32239 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCKBRP32239 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCKBRP32239 AC104109.2-201ENST00000602919 1418 ntBASIC17.13■□□□□ 0.33
CCKBRP32239 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
CCKBRP32239 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.12■□□□□ 0.33
CCKBRP32239 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCKBRP32239 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.12■□□□□ 0.33
CCKBRP32239 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.12■□□□□ 0.33
CCKBRP32239 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 AL591424.1-201ENST00000442569 1213 ntBASIC17.12■□□□□ 0.33
CCKBRP32239 PGAM5P1-201ENST00000518923 814 ntBASIC17.12■□□□□ 0.33
CCKBRP32239 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.12■□□□□ 0.33
CCKBRP32239 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCKBRP32239 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CCKBRP32239 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.12■□□□□ 0.33
CCKBRP32239 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCKBRP32239 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCKBRP32239 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCKBRP32239 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.11■□□□□ 0.33
CCKBRP32239 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCKBRP32239 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCKBRP32239 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.11■□□□□ 0.33
CCKBRP32239 AC098831.1-202ENST00000438821 336 ntBASIC17.11■□□□□ 0.33
CCKBRP32239 AC092910.1-201ENST00000482027 1129 ntBASIC17.11■□□□□ 0.33
CCKBRP32239 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.11■□□□□ 0.33
CCKBRP32239 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.11■□□□□ 0.33
CCKBRP32239 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.11■□□□□ 0.33
CCKBRP32239 AP000867.4-201ENST00000641616 219 ntBASIC17.11■□□□□ 0.33
CCKBRP32239 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCKBRP32239 OR6D1P-202ENST00000641007 5290 ntBASIC17.11■□□□□ 0.33
CCKBRP32239 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.11■□□□□ 0.33
CCKBRP32239 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
CCKBRP32239 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.1■□□□□ 0.33
CCKBRP32239 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCKBRP32239 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.1■□□□□ 0.33
CCKBRP32239 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CCKBRP32239 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCKBRP32239 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCKBRP32239 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.1■□□□□ 0.33
CCKBRP32239 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.1■□□□□ 0.33
CCKBRP32239 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.1■□□□□ 0.33
CCKBRP32239 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.1■□□□□ 0.33
CCKBRP32239 AC012640.2-201ENST00000561606 901 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms