Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN3P20807 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CAPN3P20807 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CAPN3P20807 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CAPN3P20807 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CAPN3P20807 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CAPN3P20807 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CAPN3P20807 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
CAPN3P20807 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.21■□□□□ 0.34
CAPN3P20807 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CAPN3P20807 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.2■□□□□ 0.34
CAPN3P20807 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 AK4P3-201ENST00000418260 669 ntBASIC17.2■□□□□ 0.34
CAPN3P20807 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.2■□□□□ 0.34
CAPN3P20807 AC128688.1-201ENST00000487626 519 ntBASIC17.2■□□□□ 0.34
CAPN3P20807 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.2■□□□□ 0.34
CAPN3P20807 AC009065.1-201ENST00000564055 1225 ntBASIC17.2■□□□□ 0.34
CAPN3P20807 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CAPN3P20807 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.2■□□□□ 0.34
CAPN3P20807 AL358472.4-201ENST00000633140 710 ntBASIC17.2■□□□□ 0.34
CAPN3P20807 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CAPN3P20807 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CAPN3P20807 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 LINC00304-203ENST00000565008 1864 ntBASIC17.2■□□□□ 0.34
CAPN3P20807 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CAPN3P20807 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN3P20807 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CAPN3P20807 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.19■□□□□ 0.34
CAPN3P20807 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.19■□□□□ 0.34
CAPN3P20807 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CAPN3P20807 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.19■□□□□ 0.34
CAPN3P20807 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.19■□□□□ 0.34
CAPN3P20807 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.19■□□□□ 0.34
CAPN3P20807 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 EGLN1P1-201ENST00000531623 762 ntBASIC17.19■□□□□ 0.34
CAPN3P20807 AC010203.1-204ENST00000548782 407 ntBASIC17.19■□□□□ 0.34
CAPN3P20807 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.19■□□□□ 0.34
CAPN3P20807 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.19■□□□□ 0.34
CAPN3P20807 AP005242.2-201ENST00000580065 1175 ntBASIC17.19■□□□□ 0.34
CAPN3P20807 AC006011.2-201ENST00000621313 1158 ntBASIC17.19■□□□□ 0.34
CAPN3P20807 AC112497.1-201ENST00000624824 639 ntBASIC17.19■□□□□ 0.34
CAPN3P20807 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CAPN3P20807 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.19■□□□□ 0.34
CAPN3P20807 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CAPN3P20807 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CAPN3P20807 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.19■□□□□ 0.34
CAPN3P20807 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN3P20807 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CAPN3P20807 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.18■□□□□ 0.34
CAPN3P20807 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CAPN3P20807 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.18■□□□□ 0.34
CAPN3P20807 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.18■□□□□ 0.34
CAPN3P20807 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.18■□□□□ 0.34
CAPN3P20807 KRT18P48-201ENST00000434763 852 ntBASIC17.18■□□□□ 0.34
CAPN3P20807 AC022616.7-201ENST00000525383 220 ntBASIC17.18■□□□□ 0.34
CAPN3P20807 MIR3180-4-201ENST00000582223 153 ntBASIC17.18■□□□□ 0.34
CAPN3P20807 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.18■□□□□ 0.34
CAPN3P20807 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN3P20807 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.18■□□□□ 0.34
CAPN3P20807 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms