Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC30.31■■■□□ 2.44
CFTRP13569 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC30.31■■■□□ 2.44
CFTRP13569 NMU-203ENST00000507338 658 ntTSL 3 BASIC30.31■■■□□ 2.44
CFTRP13569 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
CFTRP13569 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFTRP13569 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFTRP13569 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFTRP13569 BSG-215ENST00000618006 1329 ntTSL 2 BASIC30.31■■■□□ 2.44
CFTRP13569 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC30.31■■■□□ 2.44
CFTRP13569 PC-208ENST00000529047 1607 ntTSL 3 BASIC30.31■■■□□ 2.44
CFTRP13569 SP100-208ENST00000427101 1922 ntTSL 2 BASIC30.31■■■□□ 2.44
CFTRP13569 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFTRP13569 HARS-201ENST00000307633 1780 ntTSL 2 BASIC30.31■■■□□ 2.44
CFTRP13569 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFTRP13569 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
CFTRP13569 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFTRP13569 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFTRP13569 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC30.31■■■□□ 2.44
CFTRP13569 RPL28-209ENST00000560055 670 ntTSL 3 BASIC30.31■■■□□ 2.44
CFTRP13569 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC30.31■■■□□ 2.44
CFTRP13569 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFTRP13569 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFTRP13569 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFTRP13569 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFTRP13569 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC30.3■■■□□ 2.44
CFTRP13569 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFTRP13569 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC30.3■■■□□ 2.44
CFTRP13569 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFTRP13569 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CFTRP13569 ADM-207ENST00000530439 1839 ntTSL 2 BASIC30.3■■■□□ 2.44
CFTRP13569 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CFTRP13569 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC30.3■■■□□ 2.44
CFTRP13569 ACTG1P4-201ENST00000425123 1122 ntBASIC30.3■■■□□ 2.44
CFTRP13569 AC005034.1-201ENST00000426657 489 ntBASIC30.3■■■□□ 2.44
CFTRP13569 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC30.3■■■□□ 2.44
CFTRP13569 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC30.3■■■□□ 2.44
CFTRP13569 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC30.3■■■□□ 2.44
CFTRP13569 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC30.3■■■□□ 2.44
CFTRP13569 AC093214.1-201ENST00000511688 1107 ntBASIC30.3■■■□□ 2.44
CFTRP13569 AC112191.1-201ENST00000523689 701 ntBASIC30.3■■■□□ 2.44
CFTRP13569 AC005225.4-201ENST00000557330 545 ntBASIC30.3■■■□□ 2.44
CFTRP13569 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFTRP13569 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFTRP13569 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFTRP13569 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFTRP13569 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC30.29■■■□□ 2.44
CFTRP13569 PTGES2-AS1-201ENST00000443493 2100 ntBASIC30.29■■■□□ 2.44
CFTRP13569 AL590787.1-201ENST00000568856 1315 ntBASIC30.29■■■□□ 2.44
CFTRP13569 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CFTRP13569 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC30.29■■■□□ 2.44
CFTRP13569 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
CFTRP13569 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC30.29■■■□□ 2.44
CFTRP13569 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
CFTRP13569 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
CFTRP13569 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC30.29■■■□□ 2.44
CFTRP13569 FAM185BP-201ENST00000443595 716 ntBASIC30.29■■■□□ 2.44
CFTRP13569 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFTRP13569 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CFTRP13569 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC30.29■■■□□ 2.44
CFTRP13569 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC30.29■■■□□ 2.44
CFTRP13569 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CFTRP13569 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
CFTRP13569 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CFTRP13569 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CFTRP13569 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
CFTRP13569 AC002472.2-201ENST00000442739 958 ntBASIC30.28■■■□□ 2.44
CFTRP13569 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC30.28■■■□□ 2.44
CFTRP13569 POLD4-211ENST00000539074 714 ntTSL 3 BASIC30.28■■■□□ 2.44
CFTRP13569 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC30.28■■■□□ 2.44
CFTRP13569 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CFTRP13569 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
CFTRP13569 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CFTRP13569 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CFTRP13569 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC30.27■■■□□ 2.44
CFTRP13569 GPS2P2-201ENST00000430745 888 ntBASIC30.27■■■□□ 2.44
CFTRP13569 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC30.27■■■□□ 2.44
CFTRP13569 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC30.27■■■□□ 2.44
CFTRP13569 AL512356.2-201ENST00000546955 174 ntBASIC30.27■■■□□ 2.44
CFTRP13569 NAA60-208ENST00000570819 833 ntTSL 2 BASIC30.27■■■□□ 2.44
CFTRP13569 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CFTRP13569 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CFTRP13569 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CFTRP13569 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC30.27■■■□□ 2.44
CFTRP13569 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CFTRP13569 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC30.27■■■□□ 2.44
CFTRP13569 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CFTRP13569 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CFTRP13569 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC30.26■■■□□ 2.44
CFTRP13569 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CFTRP13569 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CFTRP13569 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CFTRP13569 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.44
CFTRP13569 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC30.26■■■□□ 2.44
CFTRP13569 KRT8P48-201ENST00000515599 1220 ntBASIC30.26■■■□□ 2.44
CFTRP13569 RNA5SP421-201ENST00000516864 134 ntBASIC30.26■■■□□ 2.44
CFTRP13569 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CFTRP13569 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC30.26■■■□□ 2.44
CFTRP13569 VPS29-207ENST00000549970 818 ntTSL 3 BASIC30.26■■■□□ 2.44
CFTRP13569 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC30.26■■■□□ 2.44
CFTRP13569 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC30.26■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms