Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH1P12830 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.42■□□□□ 0.38
CDH1P12830 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH1P12830 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH1P12830 RNF126P1-202ENST00000569893 925 ntBASIC17.42■□□□□ 0.38
CDH1P12830 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH1P12830 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH1P12830 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH1P12830 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH1P12830 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH1P12830 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDH1P12830 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH1P12830 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH1P12830 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH1P12830 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH1P12830 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH1P12830 GPR32P1-201ENST00000601788 811 ntBASIC17.41■□□□□ 0.38
CDH1P12830 AC010331.1-201ENST00000611423 582 ntBASIC17.41■□□□□ 0.38
CDH1P12830 AL121956.5-201ENST00000625261 221 ntBASIC17.41■□□□□ 0.38
CDH1P12830 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH1P12830 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH1P12830 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH1P12830 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH1P12830 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH1P12830 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH1P12830 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH1P12830 AC009053.2-201ENST00000563701 2365 ntBASIC17.4■□□□□ 0.38
CDH1P12830 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDH1P12830 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 Z83836.1-201ENST00000624605 1642 ntBASIC17.4■□□□□ 0.38
CDH1P12830 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CDH1P12830 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
CDH1P12830 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH1P12830 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH1P12830 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH1P12830 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH1P12830 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 MIR1224-201ENST00000408193 85 ntBASIC17.4■□□□□ 0.38
CDH1P12830 KRT18P35-201ENST00000510488 1269 ntBASIC17.4■□□□□ 0.38
CDH1P12830 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH1P12830 AL136038.3-201ENST00000561909 1096 ntBASIC17.4■□□□□ 0.38
CDH1P12830 AC005332.3-201ENST00000589904 676 ntBASIC17.4■□□□□ 0.38
CDH1P12830 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH1P12830 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH1P12830 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDH1P12830 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CDH1P12830 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH1P12830 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH1P12830 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDH1P12830 AC099398.1-201ENST00000567919 2776 ntBASIC17.4■□□□□ 0.38
CDH1P12830 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH1P12830 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH1P12830 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH1P12830 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CDH1P12830 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH1P12830 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH1P12830 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH1P12830 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH1P12830 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms