Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD48P09326 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.5■□□□□ 0.55
CD48P09326 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD48P09326 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD48P09326 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD48P09326 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD48P09326 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.5■□□□□ 0.55
CD48P09326 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.5■□□□□ 0.55
CD48P09326 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CD48P09326 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.5■□□□□ 0.55
CD48P09326 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD48P09326 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.5■□□□□ 0.55
CD48P09326 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD48P09326 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.5■□□□□ 0.55
CD48P09326 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CD48P09326 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.5■□□□□ 0.55
CD48P09326 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CD48P09326 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD48P09326 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
CD48P09326 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.5■□□□□ 0.55
CD48P09326 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.49■□□□□ 0.55
CD48P09326 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.49■□□□□ 0.55
CD48P09326 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.49■□□□□ 0.55
CD48P09326 AL645929.1-201ENST00000420084 975 ntBASIC18.49■□□□□ 0.55
CD48P09326 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.49■□□□□ 0.55
CD48P09326 MTCL1P1-201ENST00000446207 792 ntBASIC18.49■□□□□ 0.55
CD48P09326 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.49■□□□□ 0.55
CD48P09326 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.49■□□□□ 0.55
CD48P09326 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CD48P09326 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CD48P09326 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CD48P09326 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.49■□□□□ 0.55
CD48P09326 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.49■□□□□ 0.55
CD48P09326 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 AC108860.2-201ENST00000562760 2183 ntBASIC18.49■□□□□ 0.55
CD48P09326 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.49■□□□□ 0.55
CD48P09326 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CD48P09326 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.49■□□□□ 0.55
CD48P09326 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD48P09326 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CD48P09326 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 AC133963.1-201ENST00000504166 1679 ntBASIC18.48■□□□□ 0.55
CD48P09326 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.48■□□□□ 0.55
CD48P09326 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 AC012313.1-201ENST00000593393 3059 ntBASIC18.48■□□□□ 0.55
CD48P09326 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.48■□□□□ 0.55
CD48P09326 AL031133.1-201ENST00000406807 723 ntBASIC18.48■□□□□ 0.55
CD48P09326 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.48■□□□□ 0.55
CD48P09326 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.48■□□□□ 0.55
CD48P09326 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.48■□□□□ 0.55
CD48P09326 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.48■□□□□ 0.55
CD48P09326 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.48■□□□□ 0.55
CD48P09326 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.48■□□□□ 0.55
CD48P09326 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.48■□□□□ 0.55
CD48P09326 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.48■□□□□ 0.55
CD48P09326 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
CD48P09326 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.48■□□□□ 0.55
CD48P09326 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CD48P09326 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CD48P09326 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CD48P09326 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD48P09326 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.47■□□□□ 0.55
CD48P09326 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CD48P09326 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.47■□□□□ 0.55
CD48P09326 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CD48P09326 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms