Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 DNAJB3-201ENST00000446806 729 ntBASIC19.67■□□□□ 0.74
MMP3P08254 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.67■□□□□ 0.74
MMP3P08254 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
MMP3P08254 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP3P08254 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.67■□□□□ 0.74
MMP3P08254 AC109462.3-201ENST00000573934 613 ntBASIC19.67■□□□□ 0.74
MMP3P08254 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP3P08254 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP3P08254 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP3P08254 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP3P08254 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP3P08254 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP3P08254 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
MMP3P08254 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.67■□□□□ 0.74
MMP3P08254 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.67■□□□□ 0.74
MMP3P08254 NCF1C-201ENST00000438382 1427 ntBASIC19.67■□□□□ 0.74
MMP3P08254 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP3P08254 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP3P08254 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
MMP3P08254 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.66■□□□□ 0.74
MMP3P08254 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP3P08254 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP3P08254 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.66■□□□□ 0.74
MMP3P08254 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
MMP3P08254 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.66■□□□□ 0.74
MMP3P08254 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP3P08254 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
MMP3P08254 AC023274.1-201ENST00000418278 595 ntBASIC19.66■□□□□ 0.74
MMP3P08254 AC112482.1-201ENST00000492080 688 ntBASIC19.66■□□□□ 0.74
MMP3P08254 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.66■□□□□ 0.74
MMP3P08254 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.66■□□□□ 0.74
MMP3P08254 AC002347.1-201ENST00000569543 541 ntBASIC19.66■□□□□ 0.74
MMP3P08254 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP3P08254 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP3P08254 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
MMP3P08254 AC116407.2-201ENST00000613639 860 ntBASIC19.66■□□□□ 0.74
MMP3P08254 AC009949.1-201ENST00000623048 1830 ntBASIC19.66■□□□□ 0.74
MMP3P08254 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP3P08254 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
MMP3P08254 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MMP3P08254 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP3P08254 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP3P08254 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 AC018445.3-201ENST00000624177 1945 ntBASIC19.65■□□□□ 0.74
MMP3P08254 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP3P08254 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
MMP3P08254 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP3P08254 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP3P08254 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.65■□□□□ 0.74
MMP3P08254 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
MMP3P08254 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP3P08254 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MMP3P08254 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP3P08254 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP3P08254 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.65■□□□□ 0.74
MMP3P08254 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.64■□□□□ 0.74
MMP3P08254 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MMP3P08254 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MMP3P08254 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP3P08254 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP3P08254 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP3P08254 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP3P08254 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.64■□□□□ 0.73
MMP3P08254 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.64■□□□□ 0.73
MMP3P08254 SIGLEC30P-201ENST00000455569 941 ntBASIC19.64■□□□□ 0.73
MMP3P08254 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.64■□□□□ 0.73
MMP3P08254 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.64■□□□□ 0.73
MMP3P08254 MIR3687-2-201ENST00000577708 61 ntBASIC19.64■□□□□ 0.73
MMP3P08254 MIR3687-1-201ENST00000614492 61 ntBASIC19.64■□□□□ 0.73
MMP3P08254 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
MMP3P08254 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MMP3P08254 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP3P08254 BX276092.7-203ENST00000637198 1536 ntBASIC19.64■□□□□ 0.73
MMP3P08254 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MMP3P08254 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP3P08254 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MMP3P08254 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.64■□□□□ 0.73
MMP3P08254 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
MMP3P08254 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.64■□□□□ 0.73
MMP3P08254 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP3P08254 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms