Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.71■□□□□ 0.27
OPN1SWP03999 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.71■□□□□ 0.27
OPN1SWP03999 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.71■□□□□ 0.27
OPN1SWP03999 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.71■□□□□ 0.27
OPN1SWP03999 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
OPN1SWP03999 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
OPN1SWP03999 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
OPN1SWP03999 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
OPN1SWP03999 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
OPN1SWP03999 CROCCP2-202ENST00000412962 2773 ntBASIC16.71■□□□□ 0.26
OPN1SWP03999 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
OPN1SWP03999 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 LINC00167-201ENST00000530583 1419 ntBASIC16.7■□□□□ 0.26
OPN1SWP03999 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.7■□□□□ 0.26
OPN1SWP03999 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.7■□□□□ 0.26
OPN1SWP03999 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
OPN1SWP03999 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
OPN1SWP03999 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
OPN1SWP03999 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
OPN1SWP03999 AP001094.4-201ENST00000579008 2176 ntBASIC16.7■□□□□ 0.26
OPN1SWP03999 LINC00602-201ENST00000629776 2065 ntBASIC16.7■□□□□ 0.26
OPN1SWP03999 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.7■□□□□ 0.26
OPN1SWP03999 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.7■□□□□ 0.26
OPN1SWP03999 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.7■□□□□ 0.26
OPN1SWP03999 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.7■□□□□ 0.26
OPN1SWP03999 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
OPN1SWP03999 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
OPN1SWP03999 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.7■□□□□ 0.26
OPN1SWP03999 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.7■□□□□ 0.26
OPN1SWP03999 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.7■□□□□ 0.26
OPN1SWP03999 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPN1SWP03999 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.69■□□□□ 0.26
OPN1SWP03999 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
OPN1SWP03999 AC133963.1-201ENST00000504166 1679 ntBASIC16.69■□□□□ 0.26
OPN1SWP03999 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
OPN1SWP03999 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.69■□□□□ 0.26
OPN1SWP03999 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
OPN1SWP03999 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.69■□□□□ 0.26
OPN1SWP03999 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
OPN1SWP03999 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.69■□□□□ 0.26
OPN1SWP03999 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.69■□□□□ 0.26
OPN1SWP03999 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.69■□□□□ 0.26
OPN1SWP03999 AC128688.1-201ENST00000487626 519 ntBASIC16.69■□□□□ 0.26
OPN1SWP03999 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
OPN1SWP03999 AC010947.1-201ENST00000623454 693 ntBASIC16.69■□□□□ 0.26
OPN1SWP03999 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
OPN1SWP03999 AD000864.1-201ENST00000624076 2295 ntBASIC16.69■□□□□ 0.26
OPN1SWP03999 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.69■□□□□ 0.26
OPN1SWP03999 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.69■□□□□ 0.26
OPN1SWP03999 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
OPN1SWP03999 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
OPN1SWP03999 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.69■□□□□ 0.26
OPN1SWP03999 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
OPN1SWP03999 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
OPN1SWP03999 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.69■□□□□ 0.26
OPN1SWP03999 KRT17P2-201ENST00000300992 1314 ntBASIC16.69■□□□□ 0.26
OPN1SWP03999 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms