Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX1O43812 COX5BP2-201ENST00000392354 334 ntBASIC17.07■□□□□ 0.32
DUX1O43812 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.07■□□□□ 0.32
DUX1O43812 KRT18P58-201ENST00000527480 1120 ntBASIC17.07■□□□□ 0.32
DUX1O43812 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.07■□□□□ 0.32
DUX1O43812 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX1O43812 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUX1O43812 AC139530.3-201ENST00000620344 690 ntBASIC17.07■□□□□ 0.32
DUX1O43812 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX1O43812 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX1O43812 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX1O43812 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX1O43812 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX1O43812 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX1O43812 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX1O43812 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX1O43812 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX1O43812 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX1O43812 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX1O43812 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUX1O43812 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DUX1O43812 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX1O43812 AC079776.2-201ENST00000641154 1609 ntBASIC17.07■□□□□ 0.32
DUX1O43812 PMPCAP1-201ENST00000508114 1576 ntBASIC17.06■□□□□ 0.32
DUX1O43812 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DUX1O43812 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
DUX1O43812 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.06■□□□□ 0.32
DUX1O43812 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.06■□□□□ 0.32
DUX1O43812 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.06■□□□□ 0.32
DUX1O43812 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.06■□□□□ 0.32
DUX1O43812 AC106730.1-201ENST00000566722 1090 ntBASIC17.06■□□□□ 0.32
DUX1O43812 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.06■□□□□ 0.32
DUX1O43812 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 AD001527.2-201ENST00000622994 785 ntBASIC17.06■□□□□ 0.32
DUX1O43812 AC117500.6-201ENST00000624871 588 ntBASIC17.06■□□□□ 0.32
DUX1O43812 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.06■□□□□ 0.32
DUX1O43812 AL022326.1-202ENST00000641533 845 ntBASIC17.06■□□□□ 0.32
DUX1O43812 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.06■□□□□ 0.32
DUX1O43812 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
DUX1O43812 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
DUX1O43812 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX1O43812 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.06■□□□□ 0.32
DUX1O43812 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.06■□□□□ 0.32
DUX1O43812 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.05■□□□□ 0.32
DUX1O43812 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.05■□□□□ 0.32
DUX1O43812 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.05■□□□□ 0.32
DUX1O43812 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
DUX1O43812 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 TNXA-203ENST00000507684 2038 ntBASIC17.05■□□□□ 0.32
DUX1O43812 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 AC093503.3-201ENST00000624917 2352 ntBASIC17.05■□□□□ 0.32
DUX1O43812 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
DUX1O43812 LAGE3P1-201ENST00000425356 484 ntBASIC17.05■□□□□ 0.32
DUX1O43812 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 RPL13AP23-201ENST00000480739 586 ntBASIC17.05■□□□□ 0.32
DUX1O43812 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.05■□□□□ 0.32
DUX1O43812 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.05■□□□□ 0.32
DUX1O43812 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.05■□□□□ 0.32
DUX1O43812 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
DUX1O43812 AC008735.5-201ENST00000623544 497 ntBASIC17.05■□□□□ 0.32
DUX1O43812 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DUX1O43812 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX1O43812 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.05■□□□□ 0.32
DUX1O43812 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
DUX1O43812 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX1O43812 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
DUX1O43812 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms