Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXN1O15353 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXN1O15353 AL139400.1-201ENST00000366220 510 ntBASIC21.28■■□□□ 1
FOXN1O15353 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXN1O15353 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
FOXN1O15353 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.28■■□□□ 1
FOXN1O15353 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.28■■□□□ 1
FOXN1O15353 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.28■■□□□ 1
FOXN1O15353 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.28■■□□□ 1
FOXN1O15353 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.28■■□□□ 1
FOXN1O15353 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.28■■□□□ 1
FOXN1O15353 AC005225.4-201ENST00000557330 545 ntBASIC21.28■■□□□ 1
FOXN1O15353 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXN1O15353 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
FOXN1O15353 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXN1O15353 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
FOXN1O15353 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXN1O15353 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.28■■□□□ 1
FOXN1O15353 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 AL356309.3-201ENST00000624132 1934 ntBASIC21.27■■□□□ 1
FOXN1O15353 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.27■■□□□ 1
FOXN1O15353 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.27■■□□□ 1
FOXN1O15353 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
FOXN1O15353 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.27■■□□□ 1
FOXN1O15353 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
FOXN1O15353 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.27■■□□□ 1
FOXN1O15353 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
FOXN1O15353 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.27■■□□□ 1
FOXN1O15353 AC005498.2-205ENST00000593218 784 ntBASIC21.27■■□□□ 1
FOXN1O15353 AC090164.3-201ENST00000610780 2143 ntBASIC21.27■■□□□ 1
FOXN1O15353 Z92544.3-201ENST00000624747 417 ntBASIC21.27■■□□□ 1
FOXN1O15353 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
FOXN1O15353 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.27■■□□□ 1
FOXN1O15353 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 HOXB1-202ENST00000577092 1414 ntBASIC21.27■■□□□ 1
FOXN1O15353 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXN1O15353 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.27■□□□□ 0.99
FOXN1O15353 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.27■□□□□ 0.99
FOXN1O15353 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN1O15353 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
FOXN1O15353 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN1O15353 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN1O15353 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN1O15353 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXN1O15353 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.26■□□□□ 0.99
FOXN1O15353 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN1O15353 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN1O15353 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXN1O15353 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXN1O15353 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.26■□□□□ 0.99
FOXN1O15353 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXN1O15353 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.26■□□□□ 0.99
FOXN1O15353 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXN1O15353 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.26■□□□□ 0.99
FOXN1O15353 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXN1O15353 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN1O15353 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXN1O15353 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN1O15353 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
FOXN1O15353 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXN1O15353 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXN1O15353 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXN1O15353 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
FOXN1O15353 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXN1O15353 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
FOXN1O15353 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXN1O15353 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXN1O15353 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXN1O15353 AC107918.4-202ENST00000641623 219 ntBASIC21.25■□□□□ 0.99
FOXN1O15353 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXN1O15353 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXN1O15353 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXN1O15353 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 AC002310.6-201ENST00000624451 1377 ntBASIC21.24■□□□□ 0.99
FOXN1O15353 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
FOXN1O15353 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
FOXN1O15353 ELL2P1-201ENST00000413990 1906 ntBASIC21.24■□□□□ 0.99
FOXN1O15353 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXN1O15353 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms