Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.15■□□□□ 0.18
Ube3aO08759 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3aO08759 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.15■□□□□ 0.18
Ube3aO08759 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3aO08759 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3aO08759 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3aO08759 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ube3aO08759 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3aO08759 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3aO08759 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.15■□□□□ 0.18
Ube3aO08759 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3aO08759 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ube3aO08759 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Ube3aO08759 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Ube3aO08759 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Ube3aO08759 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Ube3aO08759 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Ube3aO08759 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.14■□□□□ 0.17
Ube3aO08759 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.14■□□□□ 0.17
Ube3aO08759 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.14■□□□□ 0.17
Ube3aO08759 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.14■□□□□ 0.17
Ube3aO08759 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ube3aO08759 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.14■□□□□ 0.17
Ube3aO08759 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Ube3aO08759 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ube3aO08759 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3aO08759 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.13■□□□□ 0.17
Ube3aO08759 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.13■□□□□ 0.17
Ube3aO08759 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.13■□□□□ 0.17
Ube3aO08759 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Ube3aO08759 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.13■□□□□ 0.17
Ube3aO08759 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.13■□□□□ 0.17
Ube3aO08759 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3aO08759 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ube3aO08759 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.13■□□□□ 0.17
Ube3aO08759 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.12■□□□□ 0.17
Ube3aO08759 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Gm15358-201ENSMUST00000119249 520 ntBASIC16.12■□□□□ 0.17
Ube3aO08759 Olfr129-201ENSMUST00000122318 993 ntBASIC16.12■□□□□ 0.17
Ube3aO08759 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.12■□□□□ 0.17
Ube3aO08759 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.12■□□□□ 0.17
Ube3aO08759 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3aO08759 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.12■□□□□ 0.17
Ube3aO08759 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3aO08759 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ube3aO08759 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3aO08759 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ube3aO08759 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3aO08759 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3aO08759 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3aO08759 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ube3aO08759 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms