Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 AL365203.3-201ENST00000609742 2057 ntBASIC12.6□□□□□ -0.39
LINC01546A6NGU7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 OR6D1P-202ENST00000641007 5290 ntBASIC12.6□□□□□ -0.39
LINC01546A6NGU7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01546A6NGU7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 NIFKP9-201ENST00000419265 221 ntBASIC12.59□□□□□ -0.39
LINC01546A6NGU7 ZNRF2P3-201ENST00000424200 374 ntBASIC12.59□□□□□ -0.39
LINC01546A6NGU7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 AC104640.1-201ENST00000562617 2109 ntBASIC12.59□□□□□ -0.39
LINC01546A6NGU7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01546A6NGU7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
LINC01546A6NGU7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
LINC01546A6NGU7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
LINC01546A6NGU7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 SLC25A1P3-201ENST00000395415 828 ntBASIC12.58□□□□□ -0.4
LINC01546A6NGU7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 LINC00167-201ENST00000530583 1419 ntBASIC12.58□□□□□ -0.4
LINC01546A6NGU7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 AC026271.3-201ENST00000571884 352 ntBASIC12.58□□□□□ -0.4
LINC01546A6NGU7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 AC011298.2-201ENST00000617989 482 ntBASIC12.58□□□□□ -0.4
LINC01546A6NGU7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms