Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPDC1A2A3K4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PTPDC1A2A3K4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPDC1A2A3K4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 HES2-202ENST00000377836 507 ntTSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 AC113404.2-201ENST00000507884 177 ntBASIC21■□□□□ 0.95
PTPDC1A2A3K4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPDC1A2A3K4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21■□□□□ 0.95
PTPDC1A2A3K4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPDC1A2A3K4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPDC1A2A3K4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms