Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TRBV6-7A0A0A0MS04 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBV6-7A0A0A0MS04 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRBV6-7A0A0A0MS04 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBV6-7A0A0A0MS04 UBALD1-205ENST00000590891 2641 ntBASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 TSPY14P-201ENST00000303979 915 ntBASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 MIR718-201ENST00000390190 70 ntBASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 AL390955.1-201ENST00000428694 934 ntBASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 CICP6-201ENST00000457191 2729 ntBASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-7A0A0A0MS04 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
TRBV6-7A0A0A0MS04 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.96□□□□□ -0.02
TRBV6-7A0A0A0MS04 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV6-7A0A0A0MS04 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV6-7A0A0A0MS04 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
TRBV6-7A0A0A0MS04 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.96□□□□□ -0.02
TRBV6-7A0A0A0MS04 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRBV6-7A0A0A0MS04 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.96□□□□□ -0.02
TRBV6-7A0A0A0MS04 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 TSPY7P-201ENST00000431358 1114 ntBASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 SEC1P-202ENST00000473944 940 ntBASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC008687.5-201ENST00000593746 558 ntBASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 OR6D1P-202ENST00000641007 5290 ntBASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 AL355312.1-201ENST00000407115 2176 ntBASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-7A0A0A0MS04 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms