Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 INGX-201ENST00000359239 846 ntBASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 AC068587.9-201ENST00000641814 219 ntBASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 GPAT2P1-201ENST00000444924 1672 ntBASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.22■□□□□ 0.51
ABCF3Q9NUQ8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 CCR12P-201ENST00000446203 998 ntBASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 CROCCP1-201ENST00000426910 5675 ntBASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 PCDH8P1-201ENST00000428983 2773 ntBASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCF3Q9NUQ8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.21■□□□□ 0.5
ABCF3Q9NUQ8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.21■□□□□ 0.5
ABCF3Q9NUQ8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.21■□□□□ 0.5
ABCF3Q9NUQ8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
ABCF3Q9NUQ8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 AC099343.3-201ENST00000605834 2503 ntBASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 AC087499.1-201ENST00000418141 1075 ntBASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 ECEL1P2-202ENST00000465689 757 ntBASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 AP003041.3-201ENST00000527151 707 ntBASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 AC010947.1-201ENST00000623454 693 ntBASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 AC133561.5-201ENST00000635547 218 ntBASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCF3Q9NUQ8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 LINC01568-207ENST00000641790 1380 ntBASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ABCF3Q9NUQ8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms