Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 AC079602.3-201ENST00000623931 403 ntBASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A13Q9NSD5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 AC113404.2-201ENST00000507884 177 ntBASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 AL512604.3-201ENST00000569583 964 ntBASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A13Q9NSD5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A13Q9NSD5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.83■□□□□ 0.29
SLC6A13Q9NSD5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.83■□□□□ 0.29
SLC6A13Q9NSD5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 AC124067.4-201ENST00000519691 2379 ntBASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 AC008687.5-201ENST00000593746 558 ntBASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 AL138966.2-201ENST00000621997 464 ntBASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 AC141257.4-201ENST00000634557 245 ntBASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 AC136944.6-201ENST00000634818 245 ntBASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 LINC01568-207ENST00000641790 1380 ntBASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A13Q9NSD5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC6A13Q9NSD5 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms